| HUGE |
Gene/Protein Characteristic Table for KIAA0596 |
|
Link to :
Rouge |
GTOP | SWISS-PROT/TrEMBL | GeneCards| RefDIC | |
| Features : DNA sequence | Protein sequence | Expression | Mapping | |
| Product ID : | ORK01981 |
|---|---|
| Accession No. : | AB011168 |
| Description : | mitogen activated protein kinase binding protein 1. |
| HUGO Gene Name : | mitogen-activated protein kinase binding protein 1 (MAPKBP1) |
| Clone Name : | hg01605 [Vector Info] |
| Flexi ORF Clone : | pF1KA0596
|
| Source : | Human adult brain |
| Note : | We replaced hj02942, former representative clones for KIAA0596 with hg01605. (2002/5/10) |
Features of the cloned DNA sequence |
Description | |
|---|---|---|
Length: 7161 bp
|
| cloned DNA seq. | |
Warning for N-terminal truncation: | NO |
Warning for coding interruption: | NO |
Length of 3'UTR 2420 bp Genome contig ID gi51511731f_39754014 PolyA signal sequence
(AATAAA,-20)
ATGTATGAACTTGTCAATAAACACAATTGTTTGTTFlanking genome sequence
(153331 - 153380)
AACCCTGGGATGCCGGCCAGTGGGGCAGGCCGAAGCGGGCGCTGCCAGTC
Chr f/r start end exon identity class ContigView(URL based/DAS) 15 f 39854014 39907343 31 99.4 Perfect prediction
Features of the protein sequence |
Description | |
|---|---|---|
Length: 1531 aa
 |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
No significant homologues
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR001680 | 97 | 125 | PF00400 | WD40 repeat |
| IPR001680 | 141 | 170 | PF00400 | WD40 repeat | |
| IPR001680 | 184 | 221 | PF00400 | WD40 repeat | |
| IPR001680 | 302 | 323 | PF00400 | WD40 repeat | |
| IPR001680 | 366 | 389 | PF00400 | WD40 repeat | |
| IPR001680 | 397 | 444 | PF00400 | WD40 repeat | |
| IPR001680 | 486 | 524 | PF00400 | WD40 repeat | |
| IPR001680 | 528 | 569 | PF00400 | WD40 repeat | |
| IPR001680 | 574 | 614 | PF00400 | WD40 repeat | |
| IPR001680 | 668 | 706 | PF00400 | WD40 repeat | |
| IPR001680 | 710 | 748 | PF00400 | WD40 repeat | |
| HMMSmart | IPR001680 | 96 | 137 | SM00320 | WD40 repeat |
| IPR001680 | 140 | 181 | SM00320 | WD40 repeat | |
| IPR001680 | 184 | 221 | SM00320 | WD40 repeat | |
| IPR001680 | 285 | 323 | SM00320 | WD40 repeat | |
| IPR001680 | 354 | 389 | SM00320 | WD40 repeat | |
| IPR001680 | 396 | 444 | SM00320 | WD40 repeat | |
| IPR001680 | 485 | 524 | SM00320 | WD40 repeat | |
| IPR001680 | 527 | 569 | SM00320 | WD40 repeat | |
| IPR001680 | 573 | 614 | SM00320 | WD40 repeat | |
| IPR001680 | 621 | 661 | SM00320 | WD40 repeat | |
| IPR001680 | 664 | 706 | SM00320 | WD40 repeat | |
| IPR001680 | 709 | 748 | SM00320 | WD40 repeat | |
| ProfileScan | IPR001680 | 103 | 230 | PS50294 | WD40 repeat |
| IPR001680 | 357 | 453 | PS50294 | WD40 repeat | |
| IPR001680 | 492 | 757 | PS50294 | WD40 repeat | |
| IPR001680 | 716 | 757 | PS50082 | WD40 repeat | |
| ScanRegExp | IPR002114 | 878 | 893 | PS00589 | Phosphotransferase system |
| Method | No. | N terminal | transmembrane region | C terminal | type | length |
|---|---|---|---|---|---|---|
| - | - | - | - | - | - | - |
Expression profile |
Description | |
|---|---|---|
| RT-PCR | Description |
|---|
| : GTAGATGGGACAGGTAAGTGG | |
| : CAACTCTTCAACTGCCTCACG | |
| : 95 °C |
RH mapping information |
Description | |
|---|---|---|
| : 15 |
| : GeneBridge 4 | |
| : GTAGATGGGACAGGTAAGTGG | |
| : CAACTCTTCAACTGCCTCACG | |
| : 136 bp | |
| : 95 °C |
|
How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage 
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