HUGE |
Gene/Protein Characteristic Table for KIAA0566 |
Link to :
Rouge |
GTOP | SWISS-PROT/TrEMBL | GeneCards| RefDIC | |
Features : DNA sequence | Protein sequence | Expression | Mapping | |
Product ID : | ORK04208 |
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Accession No. : | AB011138 |
Description : | Probable phospholipid-transporting ATPase VA. |
HUGO Gene Name : | ATPase, class V, type 10A (ATP10A) |
Clone Name : | hh01910 [Vector Info] |
Source : | Human adult brain |
Features of the cloned DNA sequence |
Description | |
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Length: 5562 bp
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cloned DNA seq. | |
Warning for N-terminal truncation: | YES |
Warning for coding interruption: | YES |
Features of the protein sequence |
Description | |
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Length: 1163 aa
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Search method | interpro_ID | From | To | Entry | Definition |
---|---|---|---|---|---|
FPrintScan | IPR001757 | 89 | 103 | PR00119 | ATPase |
IPR001757 | 693 | 712 | PR00119 | ATPase | |
HMMPfam | IPR013200 | 687 | 710 | PF08282 | HAD superfamily hydrolase-like |
HMMTigr | IPR006539 | 3 | 973 | TIGR01652 | Phospholipid-translocating P-type ATPase |
IPR001757 | 521 | 570 | TIGR01494 | ATPase | |
IPR001757 | 662 | 773 | TIGR01494 | ATPase | |
ScanRegExp | IPR001757 | 91 | 97 | PS00154 | ATPase |
Method | No. | N terminal | transmembrane region | C terminal | type | length |
---|---|---|---|---|---|---|
SOSUI2 | 1 | 24 | YSFLTMIIVLQVLIPISLYVSIE | 46 | PRIMARY | 23 |
2 | 772 | FFCGFSASTMIDQWYLIFFNLLF | 794 | PRIMARY | 23 | |
3 | 836 | WFNMADAAFQSLVCFSIPYLAYY | 858 | SECONDARY | 23 | |
4 | 865 | FTWGTPIVTIALLTFLLHLGIET | 887 | PRIMARY | 23 | |
5 | 895 | WITCGFSVLLFFTVALIYNASCA | 917 | SECONDARY | 23 | |
6 | 930 | QALLGDPVFYLTCLMTPVAALLP | 952 | SECONDARY | 23 |
Expression profile |
Description | |
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RT-PCR | Description |
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: TTTCCATAATACTCCCCATCC | |
: CTCTTGGGAAACGGAATGACC | |
: 95 °C |
RH mapping information |
Description | |
---|---|---|
: 15 |
: GeneBridge 4 | |
: TTTCCATAATACTCCCCATCC | |
: CTCTTGGGAAACGGAATGACC | |
: 124 bp | |
: 95 °C |
How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage ![]() | |