HUGE |
Gene/Protein Characteristic Table for KIAA0333 |
Link to :
Rouge |
GTOP | SWISS-PROT/TrEMBL | GeneCards| RefDIC | |
Features : DNA sequence | Protein sequence | Expression | Mapping | |
Product ID : | ORK01068 |
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Accession No. : | AB002331 |
Description : | Death-inducer obliterator 1. |
HUGO Gene Name : | death inducer-obliterator 1 (DIDO1) |
Clone Name : | pf04993 [Vector Info] |
Flexi ORF Clone : | pF1KA0333
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Source : | Human brain (hippocampus) |
Note : | We replaced hg00988, former representative clones for KIAA0333 with pf04993. (2001/10/06) |
Features of the cloned DNA sequence |
Description | |
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Length: 7013 bp
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cloned DNA seq. | |
Warning for N-terminal truncation: | NO |
Warning for coding interruption: | YES |
Length of 3'UTR 3155 bp Genome contig ID gi51511747r_60889014 PolyA signal sequence
(AATAAA,-18) +----*----+----*----+----*----+----
CCTTCTCCTCCTAAATCAATAAACATCTTTCATGGFlanking genome sequence
(100000 - 99951) ----+----*----+----*----+----*----+----*----+----*
AAACTGGTCCTTGTTTGTTTGAATTGGAACCATTTGGTGGCTCCTGGTCA
Chr f/r start end exon identity class ContigView(URL based/DAS) 20 r 60989014 61039681 16 99.8 Perfect prediction
Features of the protein sequence |
Description | |
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Length: 1223 aa
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Search method | interpro_ID | From | To | Entry | Definition |
---|---|---|---|---|---|
HMMPfam | IPR001965 | 304 | 356 | PF00628 | Zinc finger |
IPR003618 | 704 | 818 | PF07500 | Transcription elongation factor S-II | |
IPR012921 | 1091 | 1197 | PF07744 | Spen paralogue and orthologue C-terminal | |
HMMSmart | IPR001965 | 304 | 354 | SM00249 | Zinc finger |
IPR003618 | 706 | 807 | SM00510 | Transcription elongation factor S-II | |
ProfileScan | IPR001965 | 302 | 356 | PS50016 | Zinc finger |
ScanRegExp | IPR001965 | 305 | 353 | PS01359 | Zinc finger |
Method | No. | N terminal | transmembrane region | C terminal | type | length |
---|---|---|---|---|---|---|
- | - | - | - | - | - | - |
Expression profile |
Description | |
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RT-PCR | Description |
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: TCCATGCAAAGCTACTGTTAC | |
: CTGCTCGAATGGAAAGGGCTC | |
: 95 °C |
RH mapping information |
Description | |
---|---|---|
: 20 |
: GeneBridge 4 | |
: TCCATGCAAAGCTACTGTTAC | |
: CTGCTCGAATGGAAAGGGCTC | |
: 202 bp | |
: 95 °C |
How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage ![]() | |