Gene/Protein Characteristic Table for FLJ00195
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Product ID ORK05112
Accession No AK074123
Clone name sj02957
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4382 bp)
Predicted protein sequence (639 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 4382 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning Warning
Features of the protein sequence
Description

Length: 639 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAB84949 0 100.0 FLJ00195 protei...
Homo sapiens
EAW62252 7.6e-203 97.5 PHD finger prot...
Homo sapiens
BAG57599 1.4e-202 98.7 unnamed protein...
Homo sapiens
XP_517936 1.4e-202 98.6 PHD finger prot...
Pan troglodytes
EAW62256 1.4e-202 98.7 PHD finger prot...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
D87076 5.9e-140 90.6 KIAA0239
D86969 4.4e-69 54.9 KIAA0215
AB058710 1.8e-51 69.8 KIAA1807
AB033112 4.5e-21 31.3 KIAA1286
AB020683 8.5e-12 38.6 KIAA0876
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001965 278 326 PF00628 Zn-finger-like
HMMSmart IPR001965 278 324 SM00249 Zn-finger-like
IPR001965 387 442 SM00249 Zn-finger-like
ProfileScan IPR001965 276 326 PS50016 Zn-finger-like
ScanRegExp IPR001965 279 323 PS01359 Zn-finger-like
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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