Gene/Protein Characteristic Table for FLJ00266
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Product ID ORK05144
Accession No AK131077
Clone name sj02030
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5049 bp)
Predicted protein sequence (1544 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 5049 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 1544 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAC85127 0 100.0 FLJ00266 protei...
Homo sapiens
Q9HCK8 0 100.0 Chromodomain-he...
Homo sapiens
NP_065971 0 100.0 chromodomain he...
Homo sapiens
XP_001153391 0 99.9 chromodomain he...
Pan troglodytes
XP_001153458 0 99.9 chromodomain he...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB046784 0 100.0 KIAA1564
AB037756 2.3e-147 65.0 KIAA1335
AB037837 3.1e-139 56.5 KIAA1416
AB002306 1.8e-125 53.2 KIAA0308
AB007913 3.7e-21 48.2 KIAA0444
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001650 131 210 PF00271 Helicase
IPR006576 1273 1317 PF07533 BRK
IPR006576 1342 1382 PF07533 BRK
HMMSmart IPR001650 126 210 SM00490 Helicase
ProfileScan NULL 1032 1061 PS50324 NULL
NULL 1456 1471 PS50316 NULL
NULL 1502 1544 PS50312 NULL
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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