Gene/Protein Characteristic Table for KIAA1453
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Product ID ORK00841
Accession No AB040886
Description ubiquitin specific peptidase 36
Clone name fh14729
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5879 bp)
Predicted protein sequence (1123 aa)
Flexi ORF Clone FXC00841
Source Human fetal brain
Rouge ID mKIAA1453 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5879 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning Warning
Integrity of 3' end
Length of 3'UTR 2295 bp
Genome contig ID gi51511734r_74195144
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
TACATTGATTTTGATTACAAATGGTTCTGTATTAT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
ATACCACCGTTCTGACTGCTTTTTTCACTTATAGCTTGGAAATTGTCTTC

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 17 r 74295144 74348457 21 99.4 Perfect prediction
Features of the protein sequence
Description

Length: 1123 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAG10071 0 100.0 ubiquitin carbo...
synthetic construct
Q9P275 0 99.8 Ubiquitin carbo...
Homo sapiens
EAW89534 0 99.6 ubiquitin speci...
Homo sapiens
AAH71582 0 99.6 USP36 protein [...
Homo sapiens
XP_001108648 0 92.3 similar to ubiq...
Macaca mulatta
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB028986 0.00014 29.4 KIAA1063
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001394 121 422 PF00443 Peptidase C19
ProfileScan IPR001394 124 426 PS50235 Peptidase C19
ScanRegExp IPR001394 125 140 PS00972 Peptidase C19
IPR001394 367 385 PS00973 Peptidase C19
IPR003006 378 384 PS00290 Immunoglobulin/major histocompatibility complex motif
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f TCTGGCTGCTCTTCATTGACC
Primer_r TACATGCTACTCGTTTACAGG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 17
Experimental conditions
Panel name CCR
Primer_f TCTGGCTGCTCTTCATTGACC
Primer_r TACATGCTACTCGTTTACAGG
PCR product length 104 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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