Gene/Protein Characteristic Table for KIAA1063
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Product ID ORK07311
Accession No AB028986
Description ubiquitin specific peptidase 22
Clone name hj04848
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5223 bp)
Predicted protein sequence (593 aa)
Source Human adult brain
Rouge ID mKIAA1063 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5223 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 3441 bp
Genome contig ID gi51511734r_20743502
PolyA signal sequence
(AATAAA,-21)
+----*----+----*----+----*----+----
CTCTCCTATGTCATAATAAAGCTACATTTTCTCTG
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AGAACTGGCCAGTTTTCCTTTTATTGACACAAGCAGCCGAAGAGAGGGTG

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 17 r 20843502 20886944 13 99.3 Perfect prediction
Features of the protein sequence
Description

Length: 593 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q9UPT9 8.4e-184 100.0 Ubiquitin carbo...
Homo sapiens
Q5DU02 5.4e-181 97.9 Ubiquitin carbo...
Mus musculus
AAH80737 9.9e-181 97.7 Ubiquitin speci...
Mus musculus
BAE36137 1.4e-180 97.7 unnamed protein...
Mus musculus
XP_586712 2.2e-180 90.8 similar to ubiq...
Bos taurus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
D29956 8.2e-07 30.4 KIAA0055
AB040886 1e-06 29.4 KIAA1453
AB023220 1.8e-05 31.1 KIAA1003
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001607 131 200 PF02148 Zinc finger
IPR001394 241 585 PF00443 Peptidase C19
ProfileScan IPR001607 129 189 PS50271 Zinc finger
IPR001394 244 589 PS50235 Peptidase C19
ScanRegExp IPR001394 245 260 PS00972 Peptidase C19
IPR001394 531 548 PS00973 Peptidase C19
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f ATGACTGTGCTGTGGTTGGAG
Primer_r GAGAGACTACAAAGCACTGGG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 17
Experimental conditions
Panel name GeneBridge 4
Primer_f ATGACTGTGCTGTGGTTGGAG
Primer_r GAGAGACTACAAAGCACTGGG
PCR product length 113 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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