# /usr/local/bin/fasta34 -b50 -d10 -E0.01 -H -O./tmp/fh14729.fasta.huge -Q ../query/KIAA1453.ptfa ./tmplib.24314 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 KIAA1453, 1123 aa
 vs ./tmplib.24314 library

1986382 residues in  2037 sequences
  Expectation_n fit: rho(ln(x))= 11.9108+/-0.0103; mu= -14.5968+/- 0.693
 mean_var=561.3671+/-137.547, 0's: 0 Z-trim: 7  B-trim: 0 in 0/40
 Lambda= 0.054132

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 39, opt: 27, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(2037)
KIAA1063  ( 593 res)   hj04848                     ( 593)  355 43.1 0.00014


>>KIAA1063  ( 593 res)   hj04848                          (593 aa)
 initn: 469 init1: 234 opt: 355  Z-score: 173.9  bits: 43.1 E(): 0.00014
Smith-Waterman score: 517;  29.446% identity (60.058% similar) in 343 aa overlap (125-422:245-585)

          100       110       120       130       140       150    
KIAA14 CGDGVPAPQKVLFPTERLSLRWERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLLS
                                     :: :::::::.:  .: ::.:: : ...::
KIAA10 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS
          220       230       240       250       260       270    

          160       170       180       190       200       210    
KIAA14 KEHARSCHQGSFCMLCVMQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEF
        .:    .. : :..: :.. . . ...  .   : .... .   :::.   .:.:::::
KIAA10 DRHRCEMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEF
          280       290       300       310       320       330    

          220          230       240       250       260       270 
KIAA14 LRYTIDAMQKACL---NGCAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYL
       :  ..:.... :    ::  : .  .. . .. ::: : :.: : :.::..:: : ::. 
KIAA10 LIAALDVLHRHCKGDDNG-KKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFW
          340       350        360       370       380       390   

             280                                290       300      
KIAA14 DVALEIRQAA------------NIVRA-------------LELFVKADVLSGENAYMCAK
       :..:..  ..            :.: .             :. :.. . :..     :. 
KIAA10 DISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSG
           400       410       420       430       440       450   

        310       320       330         340       350              
KIAA14 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSG--GKITKDVGYPEFLNIRPYM-----SQ
       :..   ..:..:...   :  . :::: . .    :::  :..:  :.. :.:     :.
KIAA10 CHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESR
           460       470       480       490       500       510   

     360                 370       380       390       400         
KIAA14 NNGD---PV-------MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNV
        ::.   :.        :.:.::. :.: . ..:::  ...  . ::.. .:... ....
KIAA10 MNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASI
           520       530       540        550       560       570  

     410       420       430       440       450       460         
KIAA14 KVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKNIGNGIISSPLT
       : ::....:.:::                                               
KIAA10 KDVLDSEGYLLFYHKQFLEYE                                       
            580       590                                          




1123 residues in 1 query   sequences
1986382 residues in 2037 library sequences
 Scomplib [34.26]
 start: Thu Dec 18 15:23:05 2008 done: Thu Dec 18 15:23:06 2008
 Total Scan time:  0.720 Total Display time:  0.020

Function used was FASTA [version 34.26.5 April 26, 2007]