Gene/Protein Characteristic Table for KIAA1735
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Product ID ORK00905
Accession No AB051522
Description DIX domain containing 1, transcript variant 2
Clone name ph00512
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4732 bp)
Predicted protein sequence (493 aa)
Flexi ORF Clone FXC00905
Source Human brain (hippocampus)
Rouge ID mKIAA1735 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4732 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 2943 bp
Genome contig ID gi51511727f_111253336
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
CTCTAGCCTAGGCTACAGAGCAGGACCCCATCTCC
Flanking genome sequence
(144579 - 144628)
----+----*----+----*----+----*----+----*----+----*
AAAAAAAAAAAAAAAAAAGTCATTTAAAAACTGAAGAATGTTCTCTTCTT

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 11 f 111353336 111397913 16 99.9 Perfect prediction
Features of the protein sequence
Description

Length: 493 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAH33034 3e-157 100.0 DIX domain cont...
Homo sapiens
BAF82496 4.3e-157 99.8 unnamed protein...
Homo sapiens
XP_001145139 3.9e-156 99.2 DIX domain cont...
Pan troglodytes
XP_001106878 1.1e-154 98.1 similar to DIX ...
Macaca mulatta
ABG25914 4.8e-154 98.7 DIX domain cont...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001158 411 486 PD003639 DIX
HMMPfam IPR001158 408 490 PF00778 DIX
HMMSmart IPR001158 408 490 SM00021 DIX
ProfileScan IPR001158 410 490 PS50841 DIX
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f GCACAATAGAAACCATGGGGC
Primer_r CTGACTGGTTGATGGTGCTTG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 11
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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