hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11161465/chunk_1/iprscan-20080502-11161465.nocrc
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Query sequence: KIAA1735
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00778.8.fs DIX domain                                      87.0    2.6e-26   1
PF00778.8.ls DIX domain                                      88.9    1.4e-23   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00778.8.fs   1/1     408   490 ..     1    87 []    87.0  2.6e-26
PF00778.8.ls   1/1     408   490 ..     1    87 []    88.9  1.4e-23

Alignments of top-scoring domains:
PF00778.8.fs: domain 1 of 1, from 408 to 490: score 87.0, E = 2.6e-26
                   *->csetKViYhLDdEetPYlvkvpvpaervTLgdFKevLtkrngsYKYy
                       + tKV Y+ D   tP +v +p + e vTL dFK++  ++ g+ +Y 
    KIAA1735   408    STCTKVLYFTDRSLTPFMVNIPKRLEEVTLKDFKAAIDRE-GNHRYH 453  

                   fKslDpDfdCgvVKeEirdDsarLrPcfNgrvvswLvsve<-*
                   fK+lDp+f  g VKeEi+ D +   P  +g++v w++      
    KIAA1735   454 FKALDPEF--GTVKEEIFHDDDAI-PGWEGKIVAWVEEDH    490  

PF00778.8.ls: domain 1 of 1, from 408 to 490: score 88.9, E = 1.4e-23
                   *->csetKViYhLDdEetPYlvkvpvpaervTLgdFKevLtkrngsYKYy
                       + tKV Y+ D   tP +v +p + e vTL dFK++  ++ g+ +Y 
    KIAA1735   408    STCTKVLYFTDRSLTPFMVNIPKRLEEVTLKDFKAAIDRE-GNHRYH 453  

                   fKslDpDfdCgvVKeEirdDsarLrPcfNgrvvswLvsve<-*
                   fK+lDp+f  g VKeEi+ D +   P  +g++v w++      
    KIAA1735   454 FKALDPEF--GTVKEEIFHDDDAI-PGWEGKIVAWVEEDH    490  

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