Gene/Protein Characteristic Table for KIAA1678
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Product ID ORK05700
Accession No AB051465
Description SPHK1 interactor, AKAP domain containing
Clone name fh20705
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5670 bp)
Predicted protein sequence (1302 aa)
Source Human fetal brain
Rouge ID mKIAA1678 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5670 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 1759 bp
Genome contig ID gi89161199r_228452918
PolyA signal sequence
(AATAAA,-17)
+----*----+----*----+----*----+----
TAACATTGCAAATTAATCAATAAATCTCTGTTGTC
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AGATTGTTGATTATTTTTTCTGGAAGAGCTTTAAGCACCTCATAGAAAAA

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 2 r 228552918 228592708 5 99.4 Perfect prediction
Features of the protein sequence
Description

Length: 1302 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EAW70886 0 99.8 hCG1644232, iso...
Homo sapiens
NP_085126 0 99.8 sphingosine kin...
Homo sapiens
CAH18317 0 99.7 hypothetical pr...
Homo sapiens
EAW70885 0 99.5 hCG1644232, iso...
Homo sapiens
XP_001137938 0 98.8 hypothetical pr...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB014529 2.8e-06 22.8 KIAA0629
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR008382 1226 1301 PF05716 A-kinase anchor 110 kDa
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f CCTGACTCGTAGATATTAGCC
Primer_r CCGTGTAGGTCATTTAGTTGG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 2
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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