Gene/Protein Characteristic Table for KIAA1506
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Product ID ORK06006
Accession No AB040939
Description lysine (K)-specific methyltransferase 2C
Clone name ff04330
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (9929 bp)
Predicted protein sequence (3309 aa)
Source Human fetal brain
Rouge ID mKIAA1506 by Kazusa Mouse cDNA Project
Note We replaced hk04442, former representative clones for KIAA1506 with ff04330. (2002/5/10)
Features of the cloned cDNA sequence

Length: 9929 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 0 bp
Genome contig ID gi89161213r_151386957
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 7 r 151486957 151578940 33 99.8 Perfect prediction
Features of the protein sequence

Length: 3309 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAI51838 0 100.0 MLL3 protein [H...
Homo sapiens
Q8NEZ4 0 100.0 Histone-lysine ...
Homo sapiens
EAW53972 0 100.0 hCG1990594, iso...
Homo sapiens
EAW53971 0 100.0 hCG1990594, iso...
Homo sapiens
AAK00583 0 99.8 MLL3 [Homo sapi...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001965 404 455 PF00628 Zinc finger
IPR001965 456 502 PF00628 Zinc finger
IPR001965 531 584 PF00628 Zinc finger
IPR000910 1100 1153 PF00505 HMG1/2 (high mobility group) box
HMMSmart IPR001965 404 453 SM00249 Zinc finger
IPR001965 454 500 SM00249 Zinc finger
IPR001965 531 582 SM00249 Zinc finger
IPR000910 1094 1158 SM00398 HMG1/2 (high mobility group) box
ProfileScan IPR001965 402 455 PS50016 Zinc finger
IPR001965 452 502 PS50016 Zinc finger
IPR001965 529 584 PS50016 Zinc finger
ScanRegExp IPR001965 405 473 PS01359 Zinc finger
IPR000194 851 860 PS00152 ATPase
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 7
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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