Gene/Protein Characteristic Table for KIAA1325
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Product ID ORK00803
Accession No AB037746
Description LRP2 binding protein
Clone name fh14327
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5155 bp)
Predicted protein sequence (354 aa)
Flexi ORF Clone FXC00803
Source Human fetal brain
Rouge ID mKIAA1325 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5155 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 3299 bp
Genome contig ID gi89161207r_186422027
PolyA signal sequence
(AATAAA,-23)
+----*----+----*----+----*----+----
AAAAATAAAGACAATAAAATCTTCACAATAACTTT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
ACACAAAGCATTGCATAACAATGTTCTTCAATATACATGAAATAATATAA

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 4 r 186522027 186537146 8 99.1 Perfect prediction
Features of the protein sequence
Description

Length: 354 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q9P2M1 1e-148 100.0 LRP2-binding pr...
Homo sapiens
CAB82313 9e-148 99.4 hypothetical pr...
Homo sapiens
XP_001085019 4.3e-143 96.0 similar to LRP2...
Macaca mulatta
Q4R3N2 1.7e-142 95.7 LRP2-binding pr...
Macaca fascicularis
XP_001490987 1.7e-138 92.0 similar to LRP2...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB018289 7.2e-06 23.9 KIAA0746
D50931 0.00044 24.7 KIAA0141
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR013105 66 99 PF07719 Tetratricopeptide TPR_2
IPR006597 140 175 PF08238 Sel1-like
IPR006597 180 213 PF08238 Sel1-like
IPR006597 214 249 PF08238 Sel1-like
IPR006597 304 339 PF08238 Sel1-like
HMMSmart IPR006597 97 132 SM00671 Sel1-like
IPR006597 140 175 SM00671 Sel1-like
IPR006597 180 213 SM00671 Sel1-like
IPR006597 214 249 SM00671 Sel1-like
IPR006597 304 339 SM00671 Sel1-like
ProfileScan IPR013026 66 99 PS50005 Tetratricopeptide region
IPR013026 66 99 PS50293 Tetratricopeptide region
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f ACTAAGAACTGTTGAATGGCA
Primer_r AAGTGGTTGAAGGAATGTTAC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 4
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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