Gene/Protein Characteristic Table for KIAA1138
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Product ID ORK00748
Accession No AB032964
Description REX1, RNA exonuclease 1 homolog
Clone name hj05928
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4566 bp)
Predicted protein sequence (1239 aa)
Flexi ORF Clone FXC00748
Source Human adult brain
Rouge ID mKIAA1138 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 4566 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 817 bp
Genome contig ID gi42406306r_1666248
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 19 r 1766248 1799440 16 99.9 Perfect prediction
Features of the protein sequence

Length: 1239 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q8N1G1 0 100.0 RNA exonuclease...
Homo sapiens
AAH32244 0 99.9 REX1, RNA exonu...
Homo sapiens
NP_065746 0 99.8 transcription e...
Homo sapiens
EAW69451 0 99.8 REX1, RNA exonu...
Homo sapiens
EAW69450 0 99.5 REX1, RNA exonu...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR000116 406 476 PD005593 High mobility group proteins HMG-I and HMG-Y
HMMPfam IPR013520 1078 1227 PF00929 Exonuclease
HMMSmart IPR006055 1077 1236 SM00479 Exonuclease
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 19
Experimental conditions
Panel name GeneBridge 4
PCR product length 202 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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