Gene/Protein Characteristic Table for KIAA0973
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Product ID ORK00159
Accession No AB023190
Description microtubule associated serine/threonine kinase 1
Clone name hj06871
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4833 bp)
Predicted protein sequence (1583 aa)
Flexi ORF Clone FXC00159
Source Human adult brain
Rouge ID mKIAA0973 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4833 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 81 bp
Genome contig ID gi42406306f_12710348
PolyA signal sequence
(AATAAA,-24)
+----*----+----*----+----*----+----
GTACACATATAAATAAAGTGCGTCCGTGCTGCGTG
Flanking genome sequence
(136419 - 136468)
----+----*----+----*----+----*----+----*----+----*
AGTTTTCTGGGGCTCACTCCTCTCCAGGCAAGGCGAGACATCACACGACC

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 19 f 12810348 12846765 26 99.7 Perfect prediction
Features of the protein sequence
Description

Length: 1583 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q9Y2H9 0 100.0 Microtubule-ass...
Homo sapiens
XP_001109914 0 98.4 similar to micr...
Macaca mulatta
Q9R1L5 0 94.3 Microtubule-ass...
Mus musculus
Q810W7 0 93.9 Microtubule-ass...
Rattus norvegicus
AAD50548 0 92.2 syntrophin-asso...
Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB018350 3.3e-97 58.5 KIAA0807
AB011133 4.2e-84 59.4 KIAA0561
AB002301 3.6e-52 54.6 KIAA0303
AB032950 2e-10 35.4 KIAA1124
AB023182 3.4e-07 36.8 KIAA0965
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR000719 390 660 PD000001 Protein kinase
HMMPfam IPR015022 72 351 PF08926 Domain of unknown function DUF1908
IPR000719 387 660 PF00069 Protein kinase
IPR000961 678 723 PF00433 Protein kinase
IPR001478 1015 1065 PF00595 PDZ/DHR/GLGF
HMMSmart IPR001245 387 660 SM00219 Tyrosine protein kinase
IPR002290 387 660 SM00220 Serine/threonine protein kinase
IPR001478 988 1068 SM00228 PDZ/DHR/GLGF
ProfileScan IPR000719 387 660 PS50011 Protein kinase
IPR001478 980 1068 PS50106 PDZ/DHR/GLGF
ScanRegExp IPR008271 506 518 PS00108 Serine/threonine protein kinase
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f AACGCCCTTCGAAAATACCTC
Primer_r CTAGTATGCAGCAGGTTCGAC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 19
Experimental conditions
Panel name GeneBridge 4
Primer_f AACGCCCTTCGAAAATACCTC
Primer_r CTAGTATGCAGCAGGTTCGAC
PCR product length 171 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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