Gene/Protein Characteristic Table for KIAA0129
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Product ID ORK07197
Accession No D50919
Description tripartite motif containing 14, transcript variant 1
Clone name ha00496
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (4454 bp)
Predicted protein sequence (442 aa)
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0129 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 4454 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 3115 bp
Genome contig ID gi89161216r_99786458
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 9 r 99886458 99921301 6 99.1 Perfect prediction
Features of the protein sequence

Length: 442 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q14142 2.7e-183 100.0 Tripartite moti...
Homo sapiens
EAW58875 2.5e-181 99.3 tripartite moti...
Homo sapiens
XP_520143 1.8e-179 97.3 tripartite moti...
Pan troglodytes
XP_001113460 1.5e-175 95.0 similar to trip...
Macaca mulatta
Q8BVW3 3e-140 77.4 Tripartite moti...
Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR000315 33 50 PR01406 Zinc finger
IPR000315 52 66 PR01406 Zinc finger
IPR003879 265 282 PR01407 Butyrophylin-like
IPR003879 304 328 PR01407 Butyrophylin-like
IPR003879 335 348 PR01407 Butyrophylin-like
IPR003879 382 406 PR01407 Butyrophylin-like
IPR003879 413 431 PR01407 Butyrophylin-like
HMMPfam IPR000315 19 61 PF00643 Zinc finger
IPR003877 319 440 PF00622 SPla/RYanodine receptor SPRY
HMMSmart IPR000315 19 61 SM00336 Zinc finger
IPR006574 266 318 SM00589 SPRY-associated
IPR003877 319 442 SM00449 SPla/RYanodine receptor SPRY
ProfileScan IPR000315 24 58 PS50119 Zinc finger
IPR001870 249 442 PS50188 B302
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 9
Experimental conditions
Panel name Stanford G3
PCR product length 220 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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