Gene/Protein Characteristic Table for FLJ00298
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Product ID ORK06957
Accession No AK160371
Clone name sh04009
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5878 bp)
Predicted protein sequence (527 aa)
Source Human spleen
Rouge ID mFLJ00298 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5878 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 527 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD18714 0 100.0 FLJ00298 protei...
Homo sapiens
CAH72290 0 100.0 spermatogenesis...
Homo sapiens
BAG60873 0 100.0 unnamed protein...
Homo sapiens
Q96N96 0 100.0 Spermatogenesis...
Homo sapiens
BAG11117 0 100.0 spermatogenesis...
synthetic construct
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB007884 1.2e-104 60.7 KIAA0424
AB029035 3.1e-102 63.3 KIAA1112
AK074117 9e-65 100.0 FLJ00188
AB037836 2.8e-25 34.0 KIAA1415
AK024429 5.5e-15 30.9 FLJ00018
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001452 27 76 PD000066 SH3
FPrintScan IPR001452 39 54 PR00452 SH3
IPR001452 56 65 PR00452 SH3
IPR001452 67 79 PR00452 SH3
HMMPfam IPR001452 25 79 PF00018 SH3
NULL 26 79 PF07653 NULL
IPR000219 119 298 PF00621 DH domain
IPR001849 331 436 PF00169 Pleckstrin-like
HMMSmart IPR001452 25 80 SM00326 SH3
IPR000219 119 298 SM00325 DH domain
IPR001849 331 438 SM00233 Pleckstrin-like
ProfileScan IPR001452 29 81 PS50002 SH3
IPR000219 115 299 PS50010 DH domain
IPR001849 330 436 PS50003 Pleckstrin-like
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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