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Gene/Protein Characteristic Table for FLJ00298

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Product ID	ORK06957
Accession No	AK160371
Clone name	sh04009
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5878 bp) Predicted protein sequence (527 aa)
Source	Human spleen
Rouge ID	mFLJ00298 by Kazusa Mouse cDNA Project

Length: 5878 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 527 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR001452	27	76	PD000066	SH3
FPrintScan	IPR001452	39	54	PR00452	SH3
	IPR001452	56	65	PR00452	SH3
	IPR001452	67	79	PR00452	SH3
HMMPfam	IPR001452	25	79	PF00018	SH3
	NULL	26	79	PF07653	NULL
	IPR000219	119	298	PF00621	DH domain
	IPR001849	331	436	PF00169	Pleckstrin-like
HMMSmart	IPR001452	25	80	SM00326	SH3
	IPR000219	119	298	SM00325	DH domain
	IPR001849	331	438	SM00233	Pleckstrin-like
ProfileScan	IPR001452	29	81	PS50002	SH3
	IPR000219	115	299	PS50010	DH domain
	IPR001849	330	436	PS50003	Pleckstrin-like

Experimental conditions

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