Gene/Protein Characteristic Table for FLJ00390

Description

Product ID:	ORK01046
Accession No.:	AK090469
Alias Name:
Clone Name:	sj04630 [Vector Info]
Source:	Human spleen

Features of the cloned DNA sequence	Description

Length: 4096
Physical map
Restiction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Features of the predicted protein sequence	Description

Length: 322

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAC03450	4.7e-122	100.0	FLJ00390 protei...	Homo sapiens
EAW69126	1.2e-101	100.0	calcyphosine, i...	Homo sapiens
EAW69128	4.4e-79	90.2	calcyphosine, i...	Homo sapiens
Q13938	1.3e-64	100.0	Calcyphosin; Ca...	Homo sapiens
3E3R	1.4e-64	100.0	Crystal structu...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

BlastProDom IPR002048 156 216 PD000012 Calcium-binding EF-hand

HMMPfam IPR002048 158 186 PF00036 Calcium-binding EF-hand

IPR002048 194 222 PF00036 Calcium-binding EF-hand

IPR002048 230 258 PF00036 Calcium-binding EF-hand

HMMSmart IPR002048 158 186 SM00054 Calcium-binding EF-hand

IPR002048 194 222 SM00054 Calcium-binding EF-hand

IPR002048 230 258 SM00054 Calcium-binding EF-hand

ProfileScan IPR002048 159 219 PS50222 Calcium-binding EF-hand

IPR002048 222 299 PS50222 Calcium-binding EF-hand

ScanRegExp IPR002048 167 179 PS00018 Calcium-binding EF-hand

IPR002048 203 215 PS00018 Calcium-binding EF-hand

IPR002048 239 251 PS00018 Calcium-binding EF-hand

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

- - - -

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR002048	156	216	PD000012	Calcium-binding EF-hand
HMMPfam	IPR002048	158	186	PF00036	Calcium-binding EF-hand
IPR002048	194	222	PF00036	Calcium-binding EF-hand
IPR002048	230	258	PF00036	Calcium-binding EF-hand
HMMSmart	IPR002048	158	186	SM00054	Calcium-binding EF-hand
IPR002048	194	222	SM00054	Calcium-binding EF-hand
IPR002048	230	258	SM00054	Calcium-binding EF-hand
ProfileScan	IPR002048	159	219	PS50222	Calcium-binding EF-hand
IPR002048	222	299	PS50222	Calcium-binding EF-hand
ScanRegExp	IPR002048	167	179	PS00018	Calcium-binding EF-hand
IPR002048	203	215	PS00018	Calcium-binding EF-hand
IPR002048	239	251	PS00018	Calcium-binding EF-hand

Method	From	To	amino acid sequence
-	-	-	-

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	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO