GPRC5C ORF clone pFN21AE9462

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE9462

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AE9462 Sequence (with vector) Restriction Map

Product ID

FHC05694

ORF Sequence

DNA sequence (1458 bp)
Protein sequence (486 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE9462

Symbol

GPRC5C

Alias : RAIG-3, RAIG3

Description

G protein-coupled receptor, class C, group 5, member C, transcript variant 1

Original Clone ID

cp99462

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1458 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 486 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11699.1 5.8e-183 100.0 GPRC5C CCDS42378.1 3.1e-169 100.0 GPRC5C CCDS10581.1 6.1e-25 40.8 GPRC5B CCDS8657.1 2.3e-21 38.5 GPRC5A CCDS8658.1 3.8e-15 37.2 GPRC5D The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR017978 105 346 PF00003 GPCR ProfileScan IPR017978 138 308 PS50259 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 47 AIHKALVMCLGLPLFLFPGAWAQ 69 PRIMARY 23 2 97 VLEAVAGAGIVTTFVLTIILVAS 119 PRIMARY 23 3 134 TQVFFLLGTLGLFCLVFACVVKP 156 PRIMARY 23 4 167 LFGVLFAICFSCLAAHVFALNFL 189 PRIMARY 23 5 201 IFTVALLLTLVEVIINTEWLIIT 223 PRIMARY 23 6 247 CAIANMDFVMALIYVMLLLLGAF 269 PRIMARY 23 7 288 VFVLLTTATSVAIWVVWIVMYTY 310 PRIMARY 23 8 325 LAIALAANAWAFVLFYVIPEVSQ 347 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_071319 486 605949 100.0 100.0 XP_005257571 496 605949 100.0 98.4 XP_016880345 541 605949 96.2 97.9 NP_061123 453 605949 100.0 93.0 XP_005257569 551 605949 96.2 96.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE9462 Download

>KIEE9462  1458 bp
ATGCGGGGGCGTGGTAGTCAACAGCAACAACCCACACGCCGGCAGGGCCAGAAACTCCCA
TCTCCCTCACCAGCCGGAAAGTACGAGTCGGCTCAGCCTGGAGGGACCCAACCAGAGCCT
GGCCTGGGAGCCAGGATGGCCATCCACAAAGCCTTGGTGATGTGCCTGGGACTGCCTCTC
TTCCTGTTCCCAGGGGCCTGGGCCCAGGGCCATGTCCCACCCGGCTGCAGCCAAGGCCTC
AACCCCCTGTACTACAACCTGTGTGACCGCTCTGGGGCGTGGGGCATCGTCCTGGAGGCC
GTGGCTGGGGCGGGCATTGTCACCACGTTTGTGCTCACCATCATCCTGGTGGCCAGCCTC
CCCTTTGTGCAGGACACCAAGAAACGGAGCCTGCTGGGGACCCAGGTATTCTTCCTTCTG
GGGACCCTGGGCCTCTTCTGCCTCGTGTTTGCCTGTGTGGTGAAGCCCGACTTCTCCACC
TGTGCCTCTCGGCGCTTCCTCTTTGGGGTTCTGTTCGCCATCTGCTTCTCTTGTCTGGCG
GCTCACGTCTTTGCCCTCAACTTCCTGGCCCGGAAGAACCACGGGCCCCGGGGCTGGGTG
ATCTTCACTGTGGCTCTGCTGCTGACCCTGGTAGAGGTCATCATCAATACAGAGTGGCTG
ATCATCACCCTGGTTCGGGGCAGTGGCGAGGGCGGCCCTCAGGGCAACAGCAGCGCAGGC
TGGGCCGTGGCCTCCCCCTGTGCCATCGCCAACATGGACTTTGTCATGGCACTCATCTAC
GTCATGCTGCTGCTGCTGGGTGCCTTCCTGGGGGCCTGGCCCGCCCTGTGTGGCCGCTAC
AAGCGCTGGCGTAAGCATGGGGTCTTTGTGCTCCTCACCACAGCCACCTCCGTTGCCATA
TGGGTGGTGTGGATCGTCATGTATACTTACGGCAACAAGCAGCACAACAGTCCCACCTGG
GATGACCCCACGCTGGCCATCGCCCTCGCCGCCAATGCCTGGGCCTTCGTCCTCTTCTAC
GTCATCCCCGAGGTCTCCCAGGTGACCAAGTCCAGCCCAGAGCAAAGCTACCAGGGGGAC
ATGTACCCCACCCGGGGCGTGGGCTATGAGACCATCCTGAAAGAGCAGAAGGGTCAGAGC
ATGTTCGTGGAGAACAAGGCCTTTTCCATGGATGAGCCGGTTGCAGCTAAGAGGCCGGTG
TCACCATACAGCGGGTACAATGGGCAGCTGCTGACCAGTGTGTACCAGCCCACTGAGATG
GCCCTGATGCACAAAGTTCCGTCCGAAGGAGCTTACGACATCATCCTCCCACGGGCCACC
GCCAACAGCCAGGTGATGGGCAGTGCCAACTCGACCCTGCGGGCTGAAGACATGTACTCG
GCCCAGAGCCACCAGGCGGCCACACCGCCGAAAGACGGCAAGAACTCTCAGGTCTTTAGA
AACCCCTACGTGTGGGAC

ORF Protein

Cloned ORF protein sequence for pFN21AE9462 Download

>KIEE9462  486 aa
MRGRGSQQQQPTRRQGQKLPSPSPAGKYESAQPGGTQPEPGLGARMAIHKALVMCLGLPL
FLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASL
PFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLA
AHVFALNFLARKNHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAG
WAVASPCAIANMDFVMALIYVMLLLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAI
WVVWIVMYTYGNKQHNSPTWDDPTLAIALAANAWAFVLFYVIPEVSQVTKSSPEQSYQGD
MYPTRGVGYETILKEQKGQSMFVENKAFSMDEPVAAKRPVSPYSGYNGQLLTSVYQPTEM
ALMHKVPSEGAYDIILPRATANSQVMGSANSTLRAEDMYSAQSHQAATPPKDGKNSQVFR
NPYVWD

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE9462 Download

>pFN21AE9462  6163 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCGGGGGCGTGGTAGTCAACAGCAACAACCCAC
ACGCCGGCAGGGCCAGAAACTCCCATCTCCCTCACCAGCCGGAAAGTACGAGTCGGCTCA
GCCTGGAGGGACCCAACCAGAGCCTGGCCTGGGAGCCAGGATGGCCATCCACAAAGCCTT
GGTGATGTGCCTGGGACTGCCTCTCTTCCTGTTCCCAGGGGCCTGGGCCCAGGGCCATGT
CCCACCCGGCTGCAGCCAAGGCCTCAACCCCCTGTACTACAACCTGTGTGACCGCTCTGG
GGCGTGGGGCATCGTCCTGGAGGCCGTGGCTGGGGCGGGCATTGTCACCACGTTTGTGCT
CACCATCATCCTGGTGGCCAGCCTCCCCTTTGTGCAGGACACCAAGAAACGGAGCCTGCT
GGGGACCCAGGTATTCTTCCTTCTGGGGACCCTGGGCCTCTTCTGCCTCGTGTTTGCCTG
TGTGGTGAAGCCCGACTTCTCCACCTGTGCCTCTCGGCGCTTCCTCTTTGGGGTTCTGTT
CGCCATCTGCTTCTCTTGTCTGGCGGCTCACGTCTTTGCCCTCAACTTCCTGGCCCGGAA
GAACCACGGGCCCCGGGGCTGGGTGATCTTCACTGTGGCTCTGCTGCTGACCCTGGTAGA
GGTCATCATCAATACAGAGTGGCTGATCATCACCCTGGTTCGGGGCAGTGGCGAGGGCGG
CCCTCAGGGCAACAGCAGCGCAGGCTGGGCCGTGGCCTCCCCCTGTGCCATCGCCAACAT
GGACTTTGTCATGGCACTCATCTACGTCATGCTGCTGCTGCTGGGTGCCTTCCTGGGGGC
CTGGCCCGCCCTGTGTGGCCGCTACAAGCGCTGGCGTAAGCATGGGGTCTTTGTGCTCCT
CACCACAGCCACCTCCGTTGCCATATGGGTGGTGTGGATCGTCATGTATACTTACGGCAA
CAAGCAGCACAACAGTCCCACCTGGGATGACCCCACGCTGGCCATCGCCCTCGCCGCCAA
TGCCTGGGCCTTCGTCCTCTTCTACGTCATCCCCGAGGTCTCCCAGGTGACCAAGTCCAG
CCCAGAGCAAAGCTACCAGGGGGACATGTACCCCACCCGGGGCGTGGGCTATGAGACCAT
CCTGAAAGAGCAGAAGGGTCAGAGCATGTTCGTGGAGAACAAGGCCTTTTCCATGGATGA
GCCGGTTGCAGCTAAGAGGCCGGTGTCACCATACAGCGGGTACAATGGGCAGCTGCTGAC
CAGTGTGTACCAGCCCACTGAGATGGCCCTGATGCACAAAGTTCCGTCCGAAGGAGCTTA
CGACATCATCCTCCCACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGCCAACTCGAC
CCTGCGGGCTGAAGACATGTACTCGGCCCAGAGCCACCAGGCGGCCACACCGCCGAAAGA
CGGCAAGAACTCTCAGGTCTTTAGAAACCCCTACGTGTGGGACGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT