KPNA5 ORF clone pFN21AE4511

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4511

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Clone info.

Species

human

Clone Name

pFN21AE4511 Sequence (with vector) Restriction Map

Product ID

FHC22739

ORF Sequence

DNA sequence (1617 bp)
Protein sequence (539 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4511

Symbol

KPNA5

Alias : IPOA6, SRP6

Description

karyopherin alpha 5 (importin alpha 6)

Original Clone ID

oc94511

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1617 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 539 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5111.1 3.9e-208 100.0 KPNA5 CCDS352.1 1.1e-174 84.0 KPNA6 CCDS3013.1 6e-167 80.1 KPNA1 CCDS32713.1 1.1e-86 48.3 KPNA2 CCDS3191.1 9.9e-83 48.1 KPNA4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002652 6 96 PF01749 Importin-alpha-like IPR000225 116 157 PF00514 Armadillo IPR000225 163 198 PF00514 Armadillo IPR000225 201 242 PF00514 Armadillo IPR000225 256 284 PF00514 Armadillo IPR000225 287 325 PF00514 Armadillo IPR000225 331 368 PF00514 Armadillo IPR000225 370 409 PF00514 Armadillo IPR000225 413 452 PF00514 Armadillo HMMSmart IPR000225 116 157 SM00185 Armadillo IPR000225 159 199 SM00185 Armadillo IPR000225 201 242 SM00185 Armadillo IPR000225 245 284 SM00185 Armadillo IPR000225 286 326 SM00185 Armadillo IPR000225 328 368 SM00185 Armadillo IPR000225 370 410 SM00185 Armadillo IPR000225 413 453 SM00185 Armadillo ProfileScan IPR002652 1 60 PS51214 Importin-alpha-like IPR000225 170 203 PS50176 Armadillo IPR000225 212 240 PS50176 Armadillo
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016866328 539 604545 100.0 100.0 NP_002260 539 604545 100.0 100.0 XP_011534107 559 604545 100.0 99.8 XP_016866327 559 604545 100.0 99.8 XP_016866329 536 604545 100.0 99.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4511 Download

>KIEE4511  1617 bp
ATGGATGCCATGGCTAGTCCAGGGAAAGATAACTATAGAATGAAAAGTTATAAGAATAAA
GCCCTAAATCCTCAAGAGATGCGTAGACGAAGAGAAGAAGAAGGAATACAGCTTAGAAAA
CAAAAAAGAGAAGAACAGTTGTTCAAACGCAGAAATGTCTATTTGCCCAGAAATGATGAA
TCTATGCTTGAAAGTCCTATACAGGATCCAGATATTAGTTCCACTGTACCCATTCCAGAG
GAAGAAGTTGTTACTACAGATATGGTTCAGATGATTTTTTCTAATAATGCTGATCAACAG
CTAACAGCAACACAGAAATTTAGAAAGCTGCTTTCTAAAGAACCTAATCCACCAATAGAT
CAAGTTATACAGAAACCAGGAGTTGTACAGAGATTTGTGAAATTTCTTGAAAGAAATGAA
AATTGCACTTTACAATTTGAAGCTGCATGGGCATTAACAAATATAGCATCTGGAACTTTT
CTGCATACCAAGGTAGTGATTGAAACTGGGGCTGTTCCGATTTTTATCAAACTTCTTAAT
TCTGAACATGAAGATGTTCAGGAACAGGCTGTTTGGGCACTTGGTAATATTGCTGGTGAC
AATGCAGAATGCAGAGATTTTGTTTTGAATTGTGAAATACTTCCACCTCTTTTAGAGTTA
TTAACAAATTCAAACAGACTCACAACAACAAGAAATGCCGTGTGGGCCCTCTCAAATTTA
TGTAGAGGCAAAAACCCTCCTCCAAACTTTAGTAAGGTTTCACCTTGCTTAAATGTCCTG
TCACGACTGTTGTTTAGCAGTGACCCAGATGTGTTAGCAGACGTGTGTTGGGCCCTTTCT
TATCTCTCCGATGGACCCAATGATAAAATTCAAGCAGTCATTGATTCTGGAGTCTGTCGA
AGATTGGTGGAACTTTTGATGCACAATGATTATAAAGTTGTATCACCTGCATTAAGGGCA
GTTGGTAATATTGTGACTGGTGATGATATTCAAACACAGGTAATTTTGAATTGTTCTGCA
TTACCCTGTCTCTTACATTTATTGAGTAGCCCAAAGGAGTCAATTAGAAAAGAAGCCTGC
TGGACTGTTTCTAACATCACTGCTGGAAATAGAGCTCAGATTCAGGCTGTTATAGATGCA
AATATTTTTCCTGTTTTGATTGAGATTCTTCAGAAAGCAGAGTTTCGTACCAGAAAAGAA
GCAGCTTGGGCTATAACTAATGCAACATCAGGAGGTACTCCAGAGCAAATAAGGTATTTG
GTAGCTTTAGGCTGCATTAAACCACTTTGTGATCTTTTGACTGTTATGGACTCCAAAATA
GTCCAAGTGGCTTTAAATGGACTTGAAAATATTTTACGTCTTGGAGAACAAGAATCTAAG
CAGAATGGAATAGGCATTAATCCATACTGTGCTCTCATTGAAGAAGCATATGGTCTGGAT
AAAATTGAGTTTTTGCAAAGCCATGAAAATCAGGAAATTTACCAGAAGGCATTTGATCTG
ATTGAACATTACTTTGGTGTAGAAGAAGATGACCCCAGCATTGTACCTCAGGTGGATGAA
AACCAACAACAGTTTATATTTCAGCAGCAGGAAGCACCAATGGATGGATTTCAACTT

ORF Protein

Cloned ORF protein sequence for pFN21AE4511 Download

>KIEE4511  539 aa
MDAMASPGKDNYRMKSYKNKALNPQEMRRRREEEGIQLRKQKREEQLFKRRNVYLPRNDE
SMLESPIQDPDISSTVPIPEEEVVTTDMVQMIFSNNADQQLTATQKFRKLLSKEPNPPID
QVIQKPGVVQRFVKFLERNENCTLQFEAAWALTNIASGTFLHTKVVIETGAVPIFIKLLN
SEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNRLTTTRNAVWALSNL
CRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQAVIDSGVCR
RLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSPKESIRKEAC
WTVSNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYL
VALGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQESKQNGIGINPYCALIEEAYGLD
KIEFLQSHENQEIYQKAFDLIEHYFGVEEDDPSIVPQVDENQQQFIFQQQEAPMDGFQL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4511 Download

>pFN21AE4511  6322 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGATGCCATGGCTAGTCCAGGGAAAGATAACTA
TAGAATGAAAAGTTATAAGAATAAAGCCCTAAATCCTCAAGAGATGCGTAGACGAAGAGA
AGAAGAAGGAATACAGCTTAGAAAACAAAAAAGAGAAGAACAGTTGTTCAAACGCAGAAA
TGTCTATTTGCCCAGAAATGATGAATCTATGCTTGAAAGTCCTATACAGGATCCAGATAT
TAGTTCCACTGTACCCATTCCAGAGGAAGAAGTTGTTACTACAGATATGGTTCAGATGAT
TTTTTCTAATAATGCTGATCAACAGCTAACAGCAACACAGAAATTTAGAAAGCTGCTTTC
TAAAGAACCTAATCCACCAATAGATCAAGTTATACAGAAACCAGGAGTTGTACAGAGATT
TGTGAAATTTCTTGAAAGAAATGAAAATTGCACTTTACAATTTGAAGCTGCATGGGCATT
AACAAATATAGCATCTGGAACTTTTCTGCATACCAAGGTAGTGATTGAAACTGGGGCTGT
TCCGATTTTTATCAAACTTCTTAATTCTGAACATGAAGATGTTCAGGAACAGGCTGTTTG
GGCACTTGGTAATATTGCTGGTGACAATGCAGAATGCAGAGATTTTGTTTTGAATTGTGA
AATACTTCCACCTCTTTTAGAGTTATTAACAAATTCAAACAGACTCACAACAACAAGAAA
TGCCGTGTGGGCCCTCTCAAATTTATGTAGAGGCAAAAACCCTCCTCCAAACTTTAGTAA
GGTTTCACCTTGCTTAAATGTCCTGTCACGACTGTTGTTTAGCAGTGACCCAGATGTGTT
AGCAGACGTGTGTTGGGCCCTTTCTTATCTCTCCGATGGACCCAATGATAAAATTCAAGC
AGTCATTGATTCTGGAGTCTGTCGAAGATTGGTGGAACTTTTGATGCACAATGATTATAA
AGTTGTATCACCTGCATTAAGGGCAGTTGGTAATATTGTGACTGGTGATGATATTCAAAC
ACAGGTAATTTTGAATTGTTCTGCATTACCCTGTCTCTTACATTTATTGAGTAGCCCAAA
GGAGTCAATTAGAAAAGAAGCCTGCTGGACTGTTTCTAACATCACTGCTGGAAATAGAGC
TCAGATTCAGGCTGTTATAGATGCAAATATTTTTCCTGTTTTGATTGAGATTCTTCAGAA
AGCAGAGTTTCGTACCAGAAAAGAAGCAGCTTGGGCTATAACTAATGCAACATCAGGAGG
TACTCCAGAGCAAATAAGGTATTTGGTAGCTTTAGGCTGCATTAAACCACTTTGTGATCT
TTTGACTGTTATGGACTCCAAAATAGTCCAAGTGGCTTTAAATGGACTTGAAAATATTTT
ACGTCTTGGAGAACAAGAATCTAAGCAGAATGGAATAGGCATTAATCCATACTGTGCTCT
CATTGAAGAAGCATATGGTCTGGATAAAATTGAGTTTTTGCAAAGCCATGAAAATCAGGA
AATTTACCAGAAGGCATTTGATCTGATTGAACATTACTTTGGTGTAGAAGAAGATGACCC
CAGCATTGTACCTCAGGTGGATGAAAACCAACAACAGTTTATATTTCAGCAGCAGGAAGC
ACCAATGGATGGATTTCAACTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT