TRIM42 ORF clone pFN21AE4205

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4205

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Clone info.

Species

human

Clone Name

pFN21AE4205 Sequence (with vector) Restriction Map

Product ID

FHC21717

ORF Sequence

DNA sequence (2169 bp)
Protein sequence (723 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4205

Symbol

TRIM42

Alias : PPP1R40, T4A1

Description

tripartite motif containing 42

Original Clone ID

cp94205

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2169 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 723 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3113.1 6.4e-191 99.9 TRIM42 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000315 286 326 PF00643 Zinc finger IPR003961 616 691 PF00041 Fibronectin HMMSmart IPR000315 233 280 SM00336 Zinc finger IPR000315 285 326 SM00336 Zinc finger IPR003961 603 688 SM00060 Fibronectin ProfileScan IPR001841 146 192 PS50089 Zinc finger IPR000315 285 326 PS50119 Zinc finger IPR017903 434 492 PS51262 COS domain IPR003961 600 698 PS50853 Fibronectin Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4205 Download

>KIEE4205  2169 bp
ATGGAAACTGCTATGTGCGTTTGCTGTCCATGTTGTACATGGCAGAGATGTTGTCCTCAG
TTATGCTCCTGTCTGTGCTGCAAGTTCATCTTCACCTCAGAGCGGAACTGCACCTGCTTC
CCCTGCCCTTACAAAGATGAGCGGAACTGCCAGTTCTGCCACTGCACCTGTTCTGAGAGC
CCCAACTGCCATTGGTGTTGCTGCTCTTGGGCCAATGATCCCAACTGTAAGTGCTGCTGC
ACAGCCAGCAGCAATCTCAACTGCTACTACTATGAGAGCCGCTGCTGCCGCAATACCATC
ATCACTTTCCACAAGGGCCGCCTCAGGAGCATCCATACCTCCTCCAAGACTGCCCTGCGC
ACTGGGAGCAGCGATACCCAGGTGGATGAAGTAAAGTCAATACCAGCCAACAGTCACCTG
GTGAACCACCTCAATTGCCCCATGTGCAGCCGGCTGCGCCTGCACTCATTCATGCTGCCC
TGCAACCACAGCCTGTGCGAGAAGTGCCTGCGGCAGCTGCAGAAGCACGCCGAGGTCACC
GAGAACTTCTTCATCCTCATCTGCCCAGTGTGCGACCGCTCGCACTGCATGCCCTACAGC
AACAAGATGCAGCTGCCCGAGAACTACCTGCACGGGCGTCTCACCAAGCGCTACATGCAG
GAGCACGGCTACCTCAAGTGGCGCTTTGACCGCTCCTCCGGGCCCATCCTCTGCCAGGTC
TGCCGCAACAGGCGCATCGCTTACAAGCGCTGCATCACCTGCCGCCTCAACCTGTGCAAC
GACTGCCTCAAGGCCTTCCACTCGGATGTGGCCATGCAAGACCACGTCTTTGTGGACACC
AGCGCCGAGGAACAGGACGAGAAGATCTGCATCCACCACCCATCCAGCCGCATCATCGAG
TACTGCCGCAATGACAACAAATTGCTCTGCACCTTCTGCAAGTTCTCTTTCCACAATGGC
CACGACACCATTAGCCTCATCGACGCCTGCTCCGAGAGGGCCGCCTCACTCTTCAGCGCC
ATCGCCAAGTTCAAAGCAGTCCGATATGAAATTGATAATGACCTAATGGAATTCAACATC
TTAAAAAACAGCTTTAAAGCTGACAAGGAGGCAAAGCGAAAAGAGATCAGAAATGGCTTT
CTCAAGTTGCGCAGCATTCTTCAGGAGAAAGAGAAGATCATCATGGAGCAGATAGAGAAT
CTAGAAGTGTCCAGGCAGAAGGAAATTGAAAAATATGTGTATGTTACAACCATGAAAGTG
AACGAGATGGATGGTCTGATCGCCTACTCCAAGGAAGCCCTGAAGGAGACTGGCCAGGTG
GCATTCCTGCAGTCAGCCAAGATCCTGGTGGACCAGATCGAGGACGGCATCCAGACCACC
TACAGGCCTGACCCACAGCTCCGGCTGCACTCAATAAACTACGTGCCCTTGGACTTTGTT
GAGCTTTCCAGTGCCATCCATGAGCTCTTCCCCACAGGGCCCAAGAAGGTACGCTCCTCA
GGGGACTCCCTGCCCTCCCCCTACCCCGTGCACTCAGAAACAATGATTGCCAGGAAGGTC
ACTTTCAGCACCCACAGCCTCGGCAACCAGCACATATACCAGCGAAGCTCCTCCATGTTG
TCCTTCAGCAACACTGACAAGAAGGCCAAGGTGGGTCTGGAGGCCTGTGGGAGAGCCCAG
TCAGCCACCCCCGCCAAACCCACAGACGGCCTCTACACCTACTGGAGTGCTGGAGCAGAC
AGCCAGTCTGTACAGAACAGCAGCAGCTTCCACAACTGGTACTCATTCAACGATGGCTCT
GTGAAGACCCCAGGCCCAATTGTTATCTACCAGACTCTGGTGTACCCAAGAGCTGCCAAG
GTTTACTGGACATGTCCAGCAGAAGACGTGGACTCTTTTGAGATGGAATTCTATGAAGTC
ATTACTTCTCCTCCTAACAACGTACAAATGGAGCTCTGTGGACAAATTCGGGACATAATG
CAGCAAAATCTGGAGCTGCACAACCTGACCCCCAACACAGAATACGTGTTTAAAGTTAGA
GCCATCAATGATAATGGTCCTGGGCAATGGAGTGATATCTGCAAGGTGGTAACACCAGAT
GGACATGGGAAGAACCGAGCTAAGTGGGGCCTGCTGAAGAATATCCAGTCTGCCCTCCAG
AAGCACTTC

ORF Protein

Cloned ORF protein sequence for pFN21AE4205 Download

>KIEE4205  723 aa
METAMCVCCPCCTWQRCCPQLCSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCSES
PNCHWCCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALR
TGSSDTQVDEVKSIPANSHLVNHLNCPMCSRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPVCDRSHCMPYSNKMQLPENYLHGRLTKRYMQEHGYLKWRFDRSSGPILCQV
CRNRRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEEQDEKICIHHPSSRIIE
YCRNDNKLLCTFCKFSFHNGHDTISLIDACSERAASLFSAIAKFKAVRYEIDNDLMEFNI
LKNSFKADKEAKRKEIRNGFLKLRSILQEKEKIIMEQIENLEVSRQKEIEKYVYVTTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQTTYRPDPQLRLHSINYVPLDFV
ELSSAIHELFPTGPKKVRSSGDSLPSPYPVHSETMIARKVTFSTHSLGNQHIYQRSSSML
SFSNTDKKAKVGLEACGRAQSATPAKPTDGLYTYWSAGADSQSVQNSSSFHNWYSFNDGS
VKTPGPIVIYQTLVYPRAAKVYWTCPAEDVDSFEMEFYEVITSPPNNVQMELCGQIRDIM
QQNLELHNLTPNTEYVFKVRAINDNGPGQWSDICKVVTPDGHGKNRAKWGLLKNIQSALQ
KHF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4205 Download

>pFN21AE4205  6874 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAAACTGCTATGTGCGTTTGCTGTCCATGTTG
TACATGGCAGAGATGTTGTCCTCAGTTATGCTCCTGTCTGTGCTGCAAGTTCATCTTCAC
CTCAGAGCGGAACTGCACCTGCTTCCCCTGCCCTTACAAAGATGAGCGGAACTGCCAGTT
CTGCCACTGCACCTGTTCTGAGAGCCCCAACTGCCATTGGTGTTGCTGCTCTTGGGCCAA
TGATCCCAACTGTAAGTGCTGCTGCACAGCCAGCAGCAATCTCAACTGCTACTACTATGA
GAGCCGCTGCTGCCGCAATACCATCATCACTTTCCACAAGGGCCGCCTCAGGAGCATCCA
TACCTCCTCCAAGACTGCCCTGCGCACTGGGAGCAGCGATACCCAGGTGGATGAAGTAAA
GTCAATACCAGCCAACAGTCACCTGGTGAACCACCTCAATTGCCCCATGTGCAGCCGGCT
GCGCCTGCACTCATTCATGCTGCCCTGCAACCACAGCCTGTGCGAGAAGTGCCTGCGGCA
GCTGCAGAAGCACGCCGAGGTCACCGAGAACTTCTTCATCCTCATCTGCCCAGTGTGCGA
CCGCTCGCACTGCATGCCCTACAGCAACAAGATGCAGCTGCCCGAGAACTACCTGCACGG
GCGTCTCACCAAGCGCTACATGCAGGAGCACGGCTACCTCAAGTGGCGCTTTGACCGCTC
CTCCGGGCCCATCCTCTGCCAGGTCTGCCGCAACAGGCGCATCGCTTACAAGCGCTGCAT
CACCTGCCGCCTCAACCTGTGCAACGACTGCCTCAAGGCCTTCCACTCGGATGTGGCCAT
GCAAGACCACGTCTTTGTGGACACCAGCGCCGAGGAACAGGACGAGAAGATCTGCATCCA
CCACCCATCCAGCCGCATCATCGAGTACTGCCGCAATGACAACAAATTGCTCTGCACCTT
CTGCAAGTTCTCTTTCCACAATGGCCACGACACCATTAGCCTCATCGACGCCTGCTCCGA
GAGGGCCGCCTCACTCTTCAGCGCCATCGCCAAGTTCAAAGCAGTCCGATATGAAATTGA
TAATGACCTAATGGAATTCAACATCTTAAAAAACAGCTTTAAAGCTGACAAGGAGGCAAA
GCGAAAAGAGATCAGAAATGGCTTTCTCAAGTTGCGCAGCATTCTTCAGGAGAAAGAGAA
GATCATCATGGAGCAGATAGAGAATCTAGAAGTGTCCAGGCAGAAGGAAATTGAAAAATA
TGTGTATGTTACAACCATGAAAGTGAACGAGATGGATGGTCTGATCGCCTACTCCAAGGA
AGCCCTGAAGGAGACTGGCCAGGTGGCATTCCTGCAGTCAGCCAAGATCCTGGTGGACCA
GATCGAGGACGGCATCCAGACCACCTACAGGCCTGACCCACAGCTCCGGCTGCACTCAAT
AAACTACGTGCCCTTGGACTTTGTTGAGCTTTCCAGTGCCATCCATGAGCTCTTCCCCAC
AGGGCCCAAGAAGGTACGCTCCTCAGGGGACTCCCTGCCCTCCCCCTACCCCGTGCACTC
AGAAACAATGATTGCCAGGAAGGTCACTTTCAGCACCCACAGCCTCGGCAACCAGCACAT
ATACCAGCGAAGCTCCTCCATGTTGTCCTTCAGCAACACTGACAAGAAGGCCAAGGTGGG
TCTGGAGGCCTGTGGGAGAGCCCAGTCAGCCACCCCCGCCAAACCCACAGACGGCCTCTA
CACCTACTGGAGTGCTGGAGCAGACAGCCAGTCTGTACAGAACAGCAGCAGCTTCCACAA
CTGGTACTCATTCAACGATGGCTCTGTGAAGACCCCAGGCCCAATTGTTATCTACCAGAC
TCTGGTGTACCCAAGAGCTGCCAAGGTTTACTGGACATGTCCAGCAGAAGACGTGGACTC
TTTTGAGATGGAATTCTATGAAGTCATTACTTCTCCTCCTAACAACGTACAAATGGAGCT
CTGTGGACAAATTCGGGACATAATGCAGCAAAATCTGGAGCTGCACAACCTGACCCCCAA
CACAGAATACGTGTTTAAAGTTAGAGCCATCAATGATAATGGTCCTGGGCAATGGAGTGA
TATCTGCAAGGTGGTAACACCAGATGGACATGGGAAGAACCGAGCTAAGTGGGGCCTGCT
GAAGAATATCCAGTCTGCCCTCCAGAAGCACTTCGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT