JRK ORF clone pFN21AE4142

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4142

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Clone info.

Species

human

Clone Name

pFN21AE4142 Sequence (with vector) Restriction Map

Product ID

FHC11253

ORF Sequence

DNA sequence (1704 bp)
Protein sequence (568 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4142

Symbol

JRK

Alias : JH8, jerky

Description

Jrk helix-turn-helix protein, transcript variant 1

Original Clone ID

cp94142

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1704 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 568 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS75796.1 0 99.8 JRK CCDS75797.1 1.5e-211 99.8 JRK CCDS8308.1 3.9e-53 35.5 JRKL CCDS3633.1 2.6e-49 33.2 TIGD2 CCDS10500.1 4.7e-36 34.1 TIGD7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR006695 14 66 PF04218 Centromere protein Cenp-B IPR004906 87 149 PF03221 Pogo transposase / Cenp-B / PDC2 IPR004875 179 382 PF03184 DDE superfamily endonuclease HMMSmart IPR006600 83 149 SM00674 Pogo transposase / Cenp-B / PDC2 ProfileScan IPR011526 11 62 PS50960 Helix-turn-helix IPR006600 77 149 PS51253 Pogo transposase / Cenp-B / PDC2
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_006716740 568 603210 99.8 100.0 NP_003715 568 603210 99.8 100.0 XP_006716741 568 603210 99.8 100.0 XP_011515657 535 603210 99.8 92.8 XP_011515656 556 603210 99.8 92.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4142 Download

>KIEE4142  1704 bp
ATGGCCTCCAAGCCGGCTGCCGGGAAGAGCAGAGGGGAGAAGCGGAAGAGGGTGGTGCTG
ACACTGAAGGAGAAGATTGACATCTGCACGCGCCTGGAGAAGGGCGAGAGCCGGAAGGCA
CTGATGCAGGAGTACAATGTGGGCATGTCCACCCTCTACGACATCAGGGCCCACAAGGCG
CAGCTGCTCCGGTTCTTCGCCAGCTCGGACTCCAACAAGGCGCTGGAGCAGCGGCGCACG
CTGCACACGCCCAAGCTGGAGCACCTGGACCGCGTCCTGTACGAGTGGTTCCTGGGGAAG
CGCTCCGAGGGCGTCCCCGTGTCAGGCCCCATGCTCATCGAGAAGGCCAAGGACTTCTAC
GAGCAGATGCAGCTCACTGAGCCCTGCGTGTTCTCCGGAGGGTGGCTTTGGCGCTTTAAG
GCCAGACACGGCATTAAAAAGCTAGATGCATCCAGTGAAAAGCAGTCAGCCGACCACCAG
GCCGCGGAGCAGTTCTGTGCGTTTTTCAGGAGCTTGGCTGCTGAGCACGGGCTGTCCGCC
GAGCAGGTTTACAACGCTGATGAGACCGGCCTTTTCTGGCGGTGCCTGCCAAATCCCACT
CCGGAAGGCGGGGCTGTGCCTGGCCCCAAGCAGGGCAAGGACCGGCTGACCGTGCTGATG
TGTGCCAACGCCACGGGCTCCCACAGGCTCAAGCCCTTGGCCATCGGGAAGTGCAGCGGT
CCCAGGGCTTTCAAAGGCATCCAGCACCTGCCCGTCGCCTATAAGGCCCAGGGGAATGCC
TGGGTGGACAAGGAGATTTTTTCCGATTGGTTCCATCATATCTTTGTGCCCTCGGTGAGA
GAGCACTTCAGAACCATAGGTTTGCCGGAAGACAGCAAAGCCGTTCTCTTGCTGGACAGC
TCCCGGGCTCACCCGCAGGAGGCCGAGCTGGTGTCCAGTAACGTTTTCACCATCTTCCTG
CCTGCCAGCGTGGCCTCATTGGTGCAGCCCATGGAGCAGGGCATTCGGAGAGATTTCATG
AGGAACTTCATTAACCCTCCGGTCCCCCTGCAGGGCCCCCATGCCCGCTACAACATGAAC
GATGCCATATTCAGCGTGGCCTGTGCCTGGAACGCAGTCCCTAGCCACGTCTTCAGGCGG
GCCTGGAGGAAGCTGTGGCCGTCGGTTGCGTTTGCCGAAGGCTCCTCCTCTGAGGAGGAG
TTGGAGGCAGAGTGCTTCCCAGTGAAGCCCCACAACAAGTCCTTTGCACACATCCTGGAG
CTTGTGAAGGAAGGCTCCTCCTGCCCGGGCCAGCTTCGCCAGCGCCAGGCCGCCAGCTGG
GGGGTAGCGGGAAGGGAGGCAGAAGGGGGACGGCCCCCTGCTGCCACGTCGCCAGCAGAG
GTTGTGTGGAGTTCAGAAAAGACTCCAAAAGCTGACCAGGACGGCGGAGGAGATCCTGGT
GAGGGCGAGGAGGTGGCCTGGGAGCAGGCGGCCGTGGCCTTTGACGCAGTCCTGCGCTTT
GCGGAGCGGCAGCCATGCTTCAGTGCGCAGGAAGTGGGGCAGCTGCGGGCGCTGCGTGCC
GTGTTCCGGAGCCAGCAGCAGGTGAGGAGGCGGCGTGGTGCCCTCGGGGCTGTGGTCAAG
GTTGAAGCCCTCCAGGAGGGCCCTGGTGGCTGTGGGGCCACAGCTCAGTCTCCCTTGCCC
TGCTCATCCACAGCAGGTGACAAC

ORF Protein

Cloned ORF protein sequence for pFN21AE4142 Download

>KIEE4142  568 aa
MASKPAAGKSRGEKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKA
QLLRFFASSDSNKALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFY
EQMQLTEPCVFSGGWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSA
EQVYNADETGLFWRCLPNPTPEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSG
PRAFKGIQHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAVLLLDS
SRAHPQEAELVSSNVFTIFLPASVASLVQPMEQGIRRDFMRNFINPPVPLQGPHARYNMN
DAIFSVACAWNAVPSHVFRRAWRKLWPSVAFAEGSSSEEELEAECFPVKPHNKSFAHILE
LVKEGSSCPGQLRQRQAASWGVAGREAEGGRPPAATSPAEVVWSSEKTPKADQDGGGDPG
EGEEVAWEQAAVAFDAVLRFAERQPCFSAQEVGQLRALRAVFRSQQQVRRRRGALGAVVK
VEALQEGPGGCGATAQSPLPCSSTAGDN

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4142 Download

>pFN21AE4142  6409 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCTCCAAGCCGGCTGCCGGGAAGAGCAGAGG
GGAGAAGCGGAAGAGGGTGGTGCTGACACTGAAGGAGAAGATTGACATCTGCACGCGCCT
GGAGAAGGGCGAGAGCCGGAAGGCACTGATGCAGGAGTACAATGTGGGCATGTCCACCCT
CTACGACATCAGGGCCCACAAGGCGCAGCTGCTCCGGTTCTTCGCCAGCTCGGACTCCAA
CAAGGCGCTGGAGCAGCGGCGCACGCTGCACACGCCCAAGCTGGAGCACCTGGACCGCGT
CCTGTACGAGTGGTTCCTGGGGAAGCGCTCCGAGGGCGTCCCCGTGTCAGGCCCCATGCT
CATCGAGAAGGCCAAGGACTTCTACGAGCAGATGCAGCTCACTGAGCCCTGCGTGTTCTC
CGGAGGGTGGCTTTGGCGCTTTAAGGCCAGACACGGCATTAAAAAGCTAGATGCATCCAG
TGAAAAGCAGTCAGCCGACCACCAGGCCGCGGAGCAGTTCTGTGCGTTTTTCAGGAGCTT
GGCTGCTGAGCACGGGCTGTCCGCCGAGCAGGTTTACAACGCTGATGAGACCGGCCTTTT
CTGGCGGTGCCTGCCAAATCCCACTCCGGAAGGCGGGGCTGTGCCTGGCCCCAAGCAGGG
CAAGGACCGGCTGACCGTGCTGATGTGTGCCAACGCCACGGGCTCCCACAGGCTCAAGCC
CTTGGCCATCGGGAAGTGCAGCGGTCCCAGGGCTTTCAAAGGCATCCAGCACCTGCCCGT
CGCCTATAAGGCCCAGGGGAATGCCTGGGTGGACAAGGAGATTTTTTCCGATTGGTTCCA
TCATATCTTTGTGCCCTCGGTGAGAGAGCACTTCAGAACCATAGGTTTGCCGGAAGACAG
CAAAGCCGTTCTCTTGCTGGACAGCTCCCGGGCTCACCCGCAGGAGGCCGAGCTGGTGTC
CAGTAACGTTTTCACCATCTTCCTGCCTGCCAGCGTGGCCTCATTGGTGCAGCCCATGGA
GCAGGGCATTCGGAGAGATTTCATGAGGAACTTCATTAACCCTCCGGTCCCCCTGCAGGG
CCCCCATGCCCGCTACAACATGAACGATGCCATATTCAGCGTGGCCTGTGCCTGGAACGC
AGTCCCTAGCCACGTCTTCAGGCGGGCCTGGAGGAAGCTGTGGCCGTCGGTTGCGTTTGC
CGAAGGCTCCTCCTCTGAGGAGGAGTTGGAGGCAGAGTGCTTCCCAGTGAAGCCCCACAA
CAAGTCCTTTGCACACATCCTGGAGCTTGTGAAGGAAGGCTCCTCCTGCCCGGGCCAGCT
TCGCCAGCGCCAGGCCGCCAGCTGGGGGGTAGCGGGAAGGGAGGCAGAAGGGGGACGGCC
CCCTGCTGCCACGTCGCCAGCAGAGGTTGTGTGGAGTTCAGAAAAGACTCCAAAAGCTGA
CCAGGACGGCGGAGGAGATCCTGGTGAGGGCGAGGAGGTGGCCTGGGAGCAGGCGGCCGT
GGCCTTTGACGCAGTCCTGCGCTTTGCGGAGCGGCAGCCATGCTTCAGTGCGCAGGAAGT
GGGGCAGCTGCGGGCGCTGCGTGCCGTGTTCCGGAGCCAGCAGCAGGTGAGGAGGCGGCG
TGGTGCCCTCGGGGCTGTGGTCAAGGTTGAAGCCCTCCAGGAGGGCCCTGGTGGCTGTGG
GGCCACAGCTCAGTCTCCCTTGCCCTGCTCATCCACAGCAGGTGACAACGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT