TBC1D21 ORF clone pFN21AE4062

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4062

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Clone info.

Species

human

Clone Name

pFN21AE4062 Sequence (with vector) Restriction Map

Product ID

FHC12699

ORF Sequence

DNA sequence (900 bp)
Protein sequence (300 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4062

Symbol

TBC1D21

Alias : MgcRabGAP

Description

TBC1 domain family, member 21, transcript variant 2

Original Clone ID

cp94062

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 900 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 300 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS66822.1 1.5e-132 100.0 TBC1D21 CCDS10252.1 1.7e-124 89.2 TBC1D21 CCDS53814.1 3e-23 27.4 TBC1D15 CCDS55849.1 3e-23 27.4 TBC1D15 CCDS31858.1 3e-23 27.4 TBC1D15 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000195 26 250 PF00566 Rab-GAP/TBC domain HMMSmart IPR000195 18 254 SM00164 Rab-GAP/TBC domain ProfileScan IPR000195 21 229 PS50086 Rab-GAP/TBC domain Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4062 Download

>KIEE4062  900 bp
ATGACCACCCTCTCTCCTGAAAACAGCCTCTCTGCCAGACAGTCAGCCTCCTTCATCCTG
GGTCTGCACCCCTTCGTGAGGACTGAAGCCTGGAAATTCCTCACGGGCTACTTCTCATGG
CAGAGTTCCCAGGATGAGCGGCTCACGGTGGACAGCATGAGGAGGAAGAACTACAAGGCC
TTATGCCAAATGTATGAGAAGATTCAGCCCCTTCTGGAAAACCTGCACCGGAACTTCACA
GAGACTCGCAATAACATTGCACGTGACATTCAGAAAATCTATGACAAAGATCCCCTGGGC
AACGTCCTCATCGACAAGAAGAGGCTAGAGAAGATCCTGCTCCTGAGTTACGTCTGCAAC
ACGCAGGCAGAGTACCAGCAGGGCTTCCATGAGATGATGATGCTCTTCCAGCTGATGGTG
GAGCACGACCACGAGACCTTCTGGCTTTTCCAGTTCTTCCTGCAGAAAACGGAACACAGC
TGTGTCATCAACATTGGCGTGGCCAAGAACCTAGACATGCTCAGCACCCTGATCACCTTC
CTGGACCCCGTGTTTGCTGAGCACCTAAAAGGGAAGGGTGCAGGGGCTGTGCAGTCCCTC
TTCCCCTGGTTCTGCTTCTGCTTCCAGCGTGCCTTCAAGTCCTTCGATGATGTCTGGAGG
CTCTGGGAGGTTCTGCTGACGGGGAAGCCCTGCAGGAACTTCCAGGTGCTGGTGGCCTAC
AGCATGCTGCAGATGGTGCGGGAGCAGGTGCTGCAGGAAAGCATGGGCGGGGATGACATC
CTCCTGGCCTGCAACAACCTCATCGACCTTGATGCTGATGAGCTGATCTCTGCCGCCTGC
GTGGTTTATGCTGAGCTCATCCAGAAGGATGTTCCTCAGACATTAAAGGATTTCTTCCTC

ORF Protein

Cloned ORF protein sequence for pFN21AE4062 Download

>KIEE4062  300 aa
MTTLSPENSLSARQSASFILGLHPFVRTEAWKFLTGYFSWQSSQDERLTVDSMRRKNYKA
LCQMYEKIQPLLENLHRNFTETRNNIARDIQKIYDKDPLGNVLIDKKRLEKILLLSYVCN
TQAEYQQGFHEMMMLFQLMVEHDHETFWLFQFFLQKTEHSCVINIGVAKNLDMLSTLITF
LDPVFAEHLKGKGAGAVQSLFPWFCFCFQRAFKSFDDVWRLWEVLLTGKPCRNFQVLVAY
SMLQMVREQVLQESMGGDDILLACNNLIDLDADELISAACVVYAELIQKDVPQTLKDFFL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4062 Download

>pFN21AE4062  5605 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACCACCCTCTCTCCTGAAAACAGCCTCTCTGC
CAGACAGTCAGCCTCCTTCATCCTGGGTCTGCACCCCTTCGTGAGGACTGAAGCCTGGAA
ATTCCTCACGGGCTACTTCTCATGGCAGAGTTCCCAGGATGAGCGGCTCACGGTGGACAG
CATGAGGAGGAAGAACTACAAGGCCTTATGCCAAATGTATGAGAAGATTCAGCCCCTTCT
GGAAAACCTGCACCGGAACTTCACAGAGACTCGCAATAACATTGCACGTGACATTCAGAA
AATCTATGACAAAGATCCCCTGGGCAACGTCCTCATCGACAAGAAGAGGCTAGAGAAGAT
CCTGCTCCTGAGTTACGTCTGCAACACGCAGGCAGAGTACCAGCAGGGCTTCCATGAGAT
GATGATGCTCTTCCAGCTGATGGTGGAGCACGACCACGAGACCTTCTGGCTTTTCCAGTT
CTTCCTGCAGAAAACGGAACACAGCTGTGTCATCAACATTGGCGTGGCCAAGAACCTAGA
CATGCTCAGCACCCTGATCACCTTCCTGGACCCCGTGTTTGCTGAGCACCTAAAAGGGAA
GGGTGCAGGGGCTGTGCAGTCCCTCTTCCCCTGGTTCTGCTTCTGCTTCCAGCGTGCCTT
CAAGTCCTTCGATGATGTCTGGAGGCTCTGGGAGGTTCTGCTGACGGGGAAGCCCTGCAG
GAACTTCCAGGTGCTGGTGGCCTACAGCATGCTGCAGATGGTGCGGGAGCAGGTGCTGCA
GGAAAGCATGGGCGGGGATGACATCCTCCTGGCCTGCAACAACCTCATCGACCTTGATGC
TGATGAGCTGATCTCTGCCGCCTGCGTGGTTTATGCTGAGCTCATCCAGAAGGATGTTCC
TCAGACATTAAAGGATTTCTTCCTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT