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SpecieshumanClone NamepFN21AE2685
Sequence (with vector) Restriction Map Product IDFHC35785Cloning SiteSgfI-PmeIGenBank AccessionGeneKIEE2685SymbolHS3ST4
Alias : 3-OST-4, 30ST4, 3OST4, h3-OST-4Descriptionheparan sulfate-glucosamine 3-sulfotransferase 4Original Clone IDcp01768
Characterization of the cloned ORF
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Length: 1368 bp
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Restriction map A
Restriction map B
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Genomic Structure
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Length: 456 aa
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Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS53995.1 3.4e-76 99.8 HS3ST4 CCDS11165.1 4.9e-32 64.2 HS3ST3A1 CCDS11167.1 5.7e-32 55.4 HS3ST3B1 CCDS10606.1 6.1e-32 56.9 HS3ST2 CCDS45381.2 2.6e-30 61.0 HS3ST6
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
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Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
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Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006031 456 604059 99.8 100.0 NP_006032 390 604058 55.4 96.7 NP_006034 367 604056 56.9 92.5 Inquiries or Suggestions ?
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Cloned ORF Nucleotide sequence for pFN21AE2685 Download
>KIEE2685 1368 bp ATGGCCCGGTGGCCCGCACCTCCTCCGCCTCCGCCTCCGCCTCCACCTCTGGCCGCGCCG CCGCCGCCCGGCGCCTCTGCTAAGGGGCCGCCGGCGCGCAAGCTGCTTTTTATGTGCACC TTGTCCCTGTCTGTCACCTACCTGTGCTACAGCCTCCTGGGCGGCTCGGGCTCCCTGCAA TTCCCTCTGGCGCTGCAGGAGTCGCCGGGCGCCGCCGCCGAGCCCCCGCCGAGCCCGCCG CCACCCTCTCTGCTGCCTACCCCCGTGCGCCTCGGCGCCCCCTCGCAGCCGCCCGCGCCG CCGCCGCTGGACAACGCGAGCCACGGGGAGCCGCCCGAGCCCCCAGAGCAGCCAGCCGCC CCCGGGACCGACGGCTGGGGGCTGCCGAGCGGCGGCGGAGGCGCCCGGGACGCCTGGCTC CGGACCCCGCTGGCCCCCAGCGAGATGATCACGGCTCAGAGCGCGCTGCCGGAGAGGGAA GCGCAGGAGTCCAGCACCACCGACGAGGATCTCGCAGGCCGGAGAGCGGCCAACGGGAGC AGCGAGAGGGGCGGCGCCGTCAGCACCCCCGACTATGGGGAGAAGAAGCTGCCACAGGCG CTCATCATCGGGGTCAAGAAAGGAGGGACCCGCGCGCTGCTGGAGGCGATCCGCGTGCAC CCGGACGTGCGGGCGGTGGGCGTAGAGCCGCACTTCTTCGACAGGAACTACGAAAAGGGG TTGGAGTGGTACAGAAATGTGATGCCCAAGACTTTGGATGGGCAAATAACCATGGAGAAG ACTCCAAGTTACTTTGTGACAAATGAGGCTCCCAAGCGCATTCACTCCATGGCCAAGGAC ATCAAACTGATTGTGGTGGTGAGAAACCCCGTGACCAGGGCCATCTCTGACTACACGCAG ACACTGTCAAAGAAACCCGAGATCCCCACCTTTGAGGTGCTGGCCTTCAAAAACCGGACC CTCGGGCTGATCGATGCTTCCTGGAGTGCCATTCGAATAGGGATCTATGCGCTGCATCTG GAAAACTGGCTCCAGTATTTCCCCCTCTCCCAGATCCTCTTTGTCAGTGGTGAGCGACTC ATTGTGGACCCCGCCGGGGAAATGGCCAAAGTACAGGATTTTCTAGGCCTCAAACGTGTT GTGACTGAGAAGCATTTCTATTTCAACAAAACCAAGGGGTTCCCTTGCCTAAAGAAGCCA GAAGACAGCAGTGCCCCGAGGTGCTTAGGCAAGAGCAAAGGTCGGACTCATCCTCGCATT GACCCAGATGTCATCCACAGACTGAGGAAATTCTACAAACCCTTCAACTTGATGTTTTAC CAAATGACTGGTCAAGATTTTCAGTGGGAACAGGAAGAGGGTGATAAA
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Cloned ORF protein sequence for pFN21AE2685 Download
>KIEE2685 456 aa MARWPAPPPPPPPPPPLAAPPPPGASAKGPPARKLLFMCTLSLSVTYLCYSLLGGSGSLQ FPLALQESPGAAAEPPPSPPPPSLLPTPVRLGAPSQPPAPPPLDNASHGEPPEPPEQPAA PGTDGWGLPSGGGGARDAWLRTPLAPSEMITAQSALPEREAQESSTTDEDLAGRRAANGS SERGGAVSTPDYGEKKLPQALIIGVKKGGTRALLEAIRVHPDVRAVGVEPHFFDRNYEKG LEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTRAISDYTQ TLSKKPEIPTFEVLAFKNRTLGLIDASWSAIRIGIYALHLENWLQYFPLSQILFVSGERL IVDPAGEMAKVQDFLGLKRVVTEKHFYFNKTKGFPCLKKPEDSSAPRCLGKSKGRTHPRI DPDVIHRLRKFYKPFNLMFYQMTGQDFQWEQEEGDK
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Nucleotide Sequence (with vector) for pFN21AE2685 Download
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