TTC1 ORF clone pFN21AE2164

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE2164

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Clone info.

Species

human

Clone Name

pFN21AE2164 Sequence (with vector) Restriction Map

Product ID

FHC07932

ORF Sequence

DNA sequence (876 bp)
Protein sequence (292 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590123]

Gene

KIEE2164

Symbol

TTC1

Alias : TPR1

Description

tetratricopeptide repeat domain 1, transcript variant 1

Original Clone ID

cs03264

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 876 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 292 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4348.1 7.1e-79 99.7 TTC1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001440 123 149 PF00515 Tetratricopeptide TPR-1 IPR001440 158 188 PF00515 Tetratricopeptide TPR-1 IPR001440 191 221 PF00515 Tetratricopeptide TPR-1 HMMSmart IPR019734 116 149 SM00028 Tetratricopeptide repeat IPR019734 155 188 SM00028 Tetratricopeptide repeat IPR019734 189 222 SM00028 Tetratricopeptide repeat ProfileScan IPR019734 116 149 PS50005 Tetratricopeptide repeat IPR013026 116 222 PS50293 Tetratricopeptide repeat-containing IPR019734 155 188 PS50005 Tetratricopeptide repeat IPR019734 189 222 PS50005 Tetratricopeptide repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003305 292 601963 99.7 100.0 NP_001269429 292 601963 99.7 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE2164 Download

>KIEE2164  876 bp
ATGGGGGAGAAGTCAGAGAACTGTGGGGTTCCAGAGGATCTGTTAAATGGTTTGAAGGTT
ACAGATACTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCCTGATCCCAAAAATCAGCAT
TCCCAGAGTAAGCTGCTCAGGGATGATGAGGCCCATCTCCAGGAGGACCAGGGAGAAGAG
GAGTGTTTTCATGACTGCAGTGCCTCATTTGAGGAGGAGCCAGGAGCGGACAAGGTTGAG
AACAAATCTAATGAAGATGTGAATTCCTCTGAACTAGATGAAGAATACCTAATAGAACTG
AAAAAAAACATGTCGGATGAAGAGAAACAGAAAAGAAGAGAAGAGAGCACTAGACTAAAG
GAGGAGGGAAATGAACAGTTTAAGAAAGGAGATTATATAGAAGCTGAAAGTTCTTATAGT
CGAGCCCTCGAAATGTGCCCATCCTGCTTCCAAAAGGAGAGGTCGATTCTATTTTCAAAT
AGAGCTGCAGCAAGGATGAAACAGGACAAGAAAGAAATGGCCATCAATGACTGCAGCAAA
GCAATTCAATTAAACCCCAGCTATATCAGGGCAATATTGAGGAGAGCAGAGTTGTATGAG
AAGACGGACAAGCTAGATGAAGCCCTGGAAGACTATAAATCTATATTAGAAAAAGATCCA
TCAATACATCAAGCAAGAGAAGCTTGTATGAGATTACCTAAGCAAATTGAAGAACGTAAT
GAAAGACTAAAAGAAGAGATGTTAGGTAAATTAAAAGATCTTGGGAACTTGGTTCTCCGA
CCTTTTGGGCTCTCCACGGAAAATTTCCAGATCAAACAGGATTCCTCTACCGGCTCGTAC
TCCATCAATTTCGTTCAAAATCCAAATAATAACAGA

ORF Protein

Cloned ORF protein sequence for pFN21AE2164 Download

>KIEE2164  292 aa
MGEKSENCGVPEDLLNGLKVTDTQEAECAGPPVPDPKNQHSQSKLLRDDEAHLQEDQGEE
ECFHDCSASFEEEPGADKVENKSNEDVNSSELDEEYLIELKKNMSDEEKQKRREESTRLK
EEGNEQFKKGDYIEAESSYSRALEMCPSCFQKERSILFSNRAAARMKQDKKEMAINDCSK
AIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERN
ERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINFVQNPNNNR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE2164 Download

>pFN21AE2164  5581 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGGGAGAAGTCAGAGAACTGTGGGGTTCCAGA
GGATCTGTTAAATGGTTTGAAGGTTACAGATACTCAGGAAGCCGAGTGTGCTGGCCCTCC
AGTTCCTGATCCCAAAAATCAGCATTCCCAGAGTAAGCTGCTCAGGGATGATGAGGCCCA
TCTCCAGGAGGACCAGGGAGAAGAGGAGTGTTTTCATGACTGCAGTGCCTCATTTGAGGA
GGAGCCAGGAGCGGACAAGGTTGAGAACAAATCTAATGAAGATGTGAATTCCTCTGAACT
AGATGAAGAATACCTAATAGAACTGAAAAAAAACATGTCGGATGAAGAGAAACAGAAAAG
AAGAGAAGAGAGCACTAGACTAAAGGAGGAGGGAAATGAACAGTTTAAGAAAGGAGATTA
TATAGAAGCTGAAAGTTCTTATAGTCGAGCCCTCGAAATGTGCCCATCCTGCTTCCAAAA
GGAGAGGTCGATTCTATTTTCAAATAGAGCTGCAGCAAGGATGAAACAGGACAAGAAAGA
AATGGCCATCAATGACTGCAGCAAAGCAATTCAATTAAACCCCAGCTATATCAGGGCAAT
ATTGAGGAGAGCAGAGTTGTATGAGAAGACGGACAAGCTAGATGAAGCCCTGGAAGACTA
TAAATCTATATTAGAAAAAGATCCATCAATACATCAAGCAAGAGAAGCTTGTATGAGATT
ACCTAAGCAAATTGAAGAACGTAATGAAAGACTAAAAGAAGAGATGTTAGGTAAATTAAA
AGATCTTGGGAACTTGGTTCTCCGACCTTTTGGGCTCTCCACGGAAAATTTCCAGATCAA
ACAGGATTCCTCTACCGGCTCGTACTCCATCAATTTCGTTCAAAATCCAAATAATAACAG
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
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