FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2164, 292 aa 1>>>pF1KE2164 292 - 292 aa - 292 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.7283+/-0.000881; mu= 5.4907+/- 0.053 mean_var=162.4586+/-33.009, 0's: 0 Z-trim(112.1): 42 B-trim: 544 in 1/52 Lambda= 0.100624 statistics sampled from 12859 (12900) to 12859 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.744), E-opt: 0.2 (0.396), width: 16 Scan time: 2.560 The best scores are: opt bits E(32554) CCDS4348.1 TTC1 gene_id:7265|Hs108|chr5 ( 292) 1926 291.0 7.1e-79 >>CCDS4348.1 TTC1 gene_id:7265|Hs108|chr5 (292 aa) initn: 1926 init1: 1926 opt: 1926 Z-score: 1529.6 bits: 291.0 E(32554): 7.1e-79 Smith-Waterman score: 1926; 99.7% identity (100.0% similar) in 292 aa overlap (1-292:1-292) 10 20 30 40 50 60 pF1KE2 MGEKSENCGVPEDLLNGLKVTDTQEAECAGPPVPDPKNQHSQSKLLRDDEAHLQEDQGEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MGEKSENCGVPEDLLNGLKVTDTQEAECAGPPVPDPKNQHSQSKLLRDDEAHLQEDQGEE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ECFHDCSASFEEEPGADKVENKSNEDVNSSELDEEYLIELKKNMSDEEKQKRREESTRLK ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: CCDS43 ECFHDCSASFEEEPGADKVENKSNEDVNSSELDEEYLIELEKNMSDEEKQKRREESTRLK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 EEGNEQFKKGDYIEAESSYSRALEMCPSCFQKERSILFSNRAAARMKQDKKEMAINDCSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EEGNEQFKKGDYIEAESSYSRALEMCPSCFQKERSILFSNRAAARMKQDKKEMAINDCSK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 AIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 AIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERN 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 ERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINFVQNPNNNR :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINFVQNPNNNR 250 260 270 280 290 292 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:58:13 2016 done: Mon Nov 7 02:58:14 2016 Total Scan time: 2.560 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]