ALCAM ORF clone pFN21AE2008

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE2008

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Clone info.

Species

human

Clone Name

pFN21AE2008 Sequence (with vector) Restriction Map

Product ID

FHC28915

Flexi Clone PID

FXC28915

ORF Sequence

DNA sequence (1749 bp)
Protein sequence (583 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE2008

Symbol

ALCAM

Alias : CD166, MEMD

Description

activated leukocyte cell adhesion molecule, transcript variant 1

Original Clone ID

cs02908

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1749 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 583 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33810.1 6.6e-185 100.0 ALCAM CCDS58841.1 7.7e-160 97.6 ALCAM CCDS31690.1 7.3e-17 24.7 MCAM The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013106 34 130 PF07686 Immunoglobulin V-set IPR013162 137 231 PF08205 CD80-like HMMSmart IPR003599 26 131 SM00409 Immunoglobulin subtype IPR003596 38 115 SM00406 Immunoglobulin V-set IPR003599 255 330 SM00409 Immunoglobulin subtype IPR003598 261 320 SM00408 Immunoglobulin subtype 2 IPR003599 339 413 SM00409 Immunoglobulin subtype IPR003598 345 399 SM00408 Immunoglobulin subtype 2 IPR003598 426 492 SM00408 Immunoglobulin subtype 2 ProfileScan IPR007110 125 234 PS50835 Immunoglobulin-like IPR007110 245 328 PS50835 Immunoglobulin-like IPR007110 347 409 PS50835 Immunoglobulin-like IPR007110 416 501 PS50835 Immunoglobulin-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 3 SKGASSCRLLFCLLISATVFRPG 25 SECONDARY 23 2 527 KLIVGIVVGLLLAALVAGVVYWL 549 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001618 583 601662 100.0 100.0 NP_001230210 555 601662 100.0 95.2 NP_001230209 570 601662 97.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE2008 Download

>KIEE2008  1749 bp
ATGGAATCCAAGGGGGCCAGTTCCTGCCGTCTGCTCTTCTGCCTCTTGATCTCCGCCACC
GTCTTCAGGCCAGGCCTTGGATGGTATACTGTAAATTCAGCATATGGAGATACCATTATC
ATACCTTGCCGACTTGACGTACCTCAGAATCTCATGTTTGGCAAATGGAAATATGAAAAG
CCCGATGGCTCCCCAGTATTTATTGCCTTCAGATCCTCTACAAAGAAAAGTGTGCAGTAC
GACGATGTACCAGAATACAAAGACAGATTGAACCTCTCAGAAAACTACACTTTGTCTATC
AGTAATGCAAGGATCAGTGATGAAAAGAGATTTGTGTGCATGCTAGTAACTGAGGACAAC
GTGTTTGAGGCACCTACAATAGTCAAGGTGTTCAAGCAACCATCTAAACCTGAAATTGTA
AGCAAAGCACTGTTTCTCGAAACAGAGCAGCTAAAAAAGTTGGGTGACTGCATTTCAGAA
GACAGTTATCCAGATGGCAATATCACATGGTACAGGAATGGAAAAGTGCTACATCCCCTT
GAAGGAGCGGTGGTCATAATTTTTAAAAAGGAAATGGACCCAGTGACTCAGCTCTATACC
ATGACTTCCACCCTGGAGTACAAGACAACCAAGGCTGACATACAAATGCCATTCACCTGC
TCGGTGACATATTATGGACCATCTGGCCAGAAAACAATTCATTCTGAACAGGCAGTATTT
GATATTTACTATCCTACAGAGCAGGTGACAATACAAGTGCTGCCACCAAAAAATGCCATC
AAAGAAGGGGATAACATCACTCTTAAATGCTTAGGGAATGGCAACCCTCCCCCAGAGGAA
TTTTTGTTTTACTTACCAGGACAGCCCGAAGGAATAAGAAGCTCAAATACTTACACACTG
ACGGATGTGAGGCGCAATGCAACAGGAGACTACAAGTGTTCCCTGATAGACAAAAAAAGC
ATGATTGCTTCAACAGCCATCACAGTTCACTATTTGGATTTGTCCTTAAACCCAAGTGGA
GAAGTGACTAGACAGATTGGTGATGCCCTACCCGTGTCATGCACAATATCTGCTAGCAGG
AATGCAACTGTGGTATGGATGAAAGATAACATCAGGCTTCGATCTAGCCCGTCATTTTCT
AGTCTTCATTATCAGGATGCTGGAAACTATGTCTGCGAAACTGCTCTGCAGGAGGTTGAA
GGACTAAAGAAAAGAGAGTCATTGACTCTCATTGTAGAAGGCAAACCTCAAATAAAAATG
ACAAAGAAAACTGATCCCAGTGGACTATCTAAAACAATAATCTGCCATGTGGAAGGTTTT
CCAAAGCCAGCCATTCAATGGACAATTACTGGCAGTGGAAGCGTCATAAACCAAACAGAG
GAATCTCCTTATATTAATGGCAGGTATTATAGTAAAATTATCATTTCCCCTGAAGAGAAT
GTTACATTAACTTGCACAGCAGAAAACCAACTGGAGAGAACAGTAAACTCCTTGAATGTC
TCTGCTATAAGTATTCCAGAACACGATGAGGCAGACGAGATAAGTGATGAAAACAGAGAA
AAGGTGAATGACCAGGCAAAACTAATTGTGGGAATCGTTGTTGGTCTCCTCCTTGCTGCC
CTTGTTGCTGGTGTCGTCTACTGGCTGTACATGAAGAAGTCAAAGACTGCATCAAAACAT
GTAAACAAGGACCTCGGTAATATGGAAGAAAACAAAAAGTTAGAAGAAAACAATCACAAA
ACTGAAGCC

ORF Protein

Cloned ORF protein sequence for pFN21AE2008 Download

>KIEE2008  583 aa
MESKGASSCRLLFCLLISATVFRPGLGWYTVNSAYGDTIIIPCRLDVPQNLMFGKWKYEK
PDGSPVFIAFRSSTKKSVQYDDVPEYKDRLNLSENYTLSISNARISDEKRFVCMLVTEDN
VFEAPTIVKVFKQPSKPEIVSKALFLETEQLKKLGDCISEDSYPDGNITWYRNGKVLHPL
EGAVVIIFKKEMDPVTQLYTMTSTLEYKTTKADIQMPFTCSVTYYGPSGQKTIHSEQAVF
DIYYPTEQVTIQVLPPKNAIKEGDNITLKCLGNGNPPPEEFLFYLPGQPEGIRSSNTYTL
TDVRRNATGDYKCSLIDKKSMIASTAITVHYLDLSLNPSGEVTRQIGDALPVSCTISASR
NATVVWMKDNIRLRSSPSFSSLHYQDAGNYVCETALQEVEGLKKRESLTLIVEGKPQIKM
TKKTDPSGLSKTIICHVEGFPKPAIQWTITGSGSVINQTEESPYINGRYYSKIIISPEEN
VTLTCTAENQLERTVNSLNVSAISIPEHDEADEISDENREKVNDQAKLIVGIVVGLLLAA
LVAGVVYWLYMKKSKTASKHVNKDLGNMEENKKLEENNHKTEA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE2008 Download

>pFN21AE2008  6454 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAATCCAAGGGGGCCAGTTCCTGCCGTCTGCT
CTTCTGCCTCTTGATCTCCGCCACCGTCTTCAGGCCAGGCCTTGGATGGTATACTGTAAA
TTCAGCATATGGAGATACCATTATCATACCTTGCCGACTTGACGTACCTCAGAATCTCAT
GTTTGGCAAATGGAAATATGAAAAGCCCGATGGCTCCCCAGTATTTATTGCCTTCAGATC
CTCTACAAAGAAAAGTGTGCAGTACGACGATGTACCAGAATACAAAGACAGATTGAACCT
CTCAGAAAACTACACTTTGTCTATCAGTAATGCAAGGATCAGTGATGAAAAGAGATTTGT
GTGCATGCTAGTAACTGAGGACAACGTGTTTGAGGCACCTACAATAGTCAAGGTGTTCAA
GCAACCATCTAAACCTGAAATTGTAAGCAAAGCACTGTTTCTCGAAACAGAGCAGCTAAA
AAAGTTGGGTGACTGCATTTCAGAAGACAGTTATCCAGATGGCAATATCACATGGTACAG
GAATGGAAAAGTGCTACATCCCCTTGAAGGAGCGGTGGTCATAATTTTTAAAAAGGAAAT
GGACCCAGTGACTCAGCTCTATACCATGACTTCCACCCTGGAGTACAAGACAACCAAGGC
TGACATACAAATGCCATTCACCTGCTCGGTGACATATTATGGACCATCTGGCCAGAAAAC
AATTCATTCTGAACAGGCAGTATTTGATATTTACTATCCTACAGAGCAGGTGACAATACA
AGTGCTGCCACCAAAAAATGCCATCAAAGAAGGGGATAACATCACTCTTAAATGCTTAGG
GAATGGCAACCCTCCCCCAGAGGAATTTTTGTTTTACTTACCAGGACAGCCCGAAGGAAT
AAGAAGCTCAAATACTTACACACTGACGGATGTGAGGCGCAATGCAACAGGAGACTACAA
GTGTTCCCTGATAGACAAAAAAAGCATGATTGCTTCAACAGCCATCACAGTTCACTATTT
GGATTTGTCCTTAAACCCAAGTGGAGAAGTGACTAGACAGATTGGTGATGCCCTACCCGT
GTCATGCACAATATCTGCTAGCAGGAATGCAACTGTGGTATGGATGAAAGATAACATCAG
GCTTCGATCTAGCCCGTCATTTTCTAGTCTTCATTATCAGGATGCTGGAAACTATGTCTG
CGAAACTGCTCTGCAGGAGGTTGAAGGACTAAAGAAAAGAGAGTCATTGACTCTCATTGT
AGAAGGCAAACCTCAAATAAAAATGACAAAGAAAACTGATCCCAGTGGACTATCTAAAAC
AATAATCTGCCATGTGGAAGGTTTTCCAAAGCCAGCCATTCAATGGACAATTACTGGCAG
TGGAAGCGTCATAAACCAAACAGAGGAATCTCCTTATATTAATGGCAGGTATTATAGTAA
AATTATCATTTCCCCTGAAGAGAATGTTACATTAACTTGCACAGCAGAAAACCAACTGGA
GAGAACAGTAAACTCCTTGAATGTCTCTGCTATAAGTATTCCAGAACACGATGAGGCAGA
CGAGATAAGTGATGAAAACAGAGAAAAGGTGAATGACCAGGCAAAACTAATTGTGGGAAT
CGTTGTTGGTCTCCTCCTTGCTGCCCTTGTTGCTGGTGTCGTCTACTGGCTGTACATGAA
GAAGTCAAAGACTGCATCAAAACATGTAAACAAGGACCTCGGTAATATGGAAGAAAACAA
AAAGTTAGAAGAAAACAATCACAAAACTGAAGCCGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT