ALCAM ORF clone FXC28915

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Flexi ORF Clone FXC28915

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Clone info.

Species

human

Clone Name

pF1KE2008 Sequence (with vector) Restriction Map

Product ID

FXC28915

HaloTag Clone PID

FHC28915

ORF Sequence

DNA sequence (1749 bp)
Protein sequence (583 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE2008

Symbol

ALCAM

Alias : CD166, MEMD

Description

activated leukocyte cell adhesion molecule, transcript variant 1

Original Clone ID

cs02908

Features of the cloned ORF sequence

Description

Length: 1749 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 583 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33810.1 6.6e-185 100.0 ALCAM CCDS58841.1 7.7e-160 97.6 ALCAM CCDS31690.1 7.3e-17 24.7 MCAM The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013106 34 130 PF07686 Immunoglobulin V-set IPR013162 137 231 PF08205 CD80-like HMMSmart IPR003599 26 131 SM00409 Immunoglobulin subtype IPR003596 38 115 SM00406 Immunoglobulin V-set IPR003599 255 330 SM00409 Immunoglobulin subtype IPR003598 261 320 SM00408 Immunoglobulin subtype 2 IPR003599 339 413 SM00409 Immunoglobulin subtype IPR003598 345 399 SM00408 Immunoglobulin subtype 2 IPR003598 426 492 SM00408 Immunoglobulin subtype 2 ProfileScan IPR007110 125 234 PS50835 Immunoglobulin-like IPR007110 245 328 PS50835 Immunoglobulin-like IPR007110 347 409 PS50835 Immunoglobulin-like IPR007110 416 501 PS50835 Immunoglobulin-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 3 SKGASSCRLLFCLLISATVFRPG 25 SECONDARY 23 2 527 KLIVGIVVGLLLAALVAGVVYWL 549 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001618 583 601662 100.0 100.0 NP_001230210 555 601662 100.0 95.2 NP_001230209 570 601662 97.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE2008 Download

>KIEE2008  1749 bp
ATGGAATCCAAGGGGGCCAGTTCCTGCCGTCTGCTCTTCTGCCTCTTGATCTCCGCCACC
GTCTTCAGGCCAGGCCTTGGATGGTATACTGTAAATTCAGCATATGGAGATACCATTATC
ATACCTTGCCGACTTGACGTACCTCAGAATCTCATGTTTGGCAAATGGAAATATGAAAAG
CCCGATGGCTCCCCAGTATTTATTGCCTTCAGATCCTCTACAAAGAAAAGTGTGCAGTAC
GACGATGTACCAGAATACAAAGACAGATTGAACCTCTCAGAAAACTACACTTTGTCTATC
AGTAATGCAAGGATCAGTGATGAAAAGAGATTTGTGTGCATGCTAGTAACTGAGGACAAC
GTGTTTGAGGCACCTACAATAGTCAAGGTGTTCAAGCAACCATCTAAACCTGAAATTGTA
AGCAAAGCACTGTTTCTCGAAACAGAGCAGCTAAAAAAGTTGGGTGACTGCATTTCAGAA
GACAGTTATCCAGATGGCAATATCACATGGTACAGGAATGGAAAAGTGCTACATCCCCTT
GAAGGAGCGGTGGTCATAATTTTTAAAAAGGAAATGGACCCAGTGACTCAGCTCTATACC
ATGACTTCCACCCTGGAGTACAAGACAACCAAGGCTGACATACAAATGCCATTCACCTGC
TCGGTGACATATTATGGACCATCTGGCCAGAAAACAATTCATTCTGAACAGGCAGTATTT
GATATTTACTATCCTACAGAGCAGGTGACAATACAAGTGCTGCCACCAAAAAATGCCATC
AAAGAAGGGGATAACATCACTCTTAAATGCTTAGGGAATGGCAACCCTCCCCCAGAGGAA
TTTTTGTTTTACTTACCAGGACAGCCCGAAGGAATAAGAAGCTCAAATACTTACACACTG
ACGGATGTGAGGCGCAATGCAACAGGAGACTACAAGTGTTCCCTGATAGACAAAAAAAGC
ATGATTGCTTCAACAGCCATCACAGTTCACTATTTGGATTTGTCCTTAAACCCAAGTGGA
GAAGTGACTAGACAGATTGGTGATGCCCTACCCGTGTCATGCACAATATCTGCTAGCAGG
AATGCAACTGTGGTATGGATGAAAGATAACATCAGGCTTCGATCTAGCCCGTCATTTTCT
AGTCTTCATTATCAGGATGCTGGAAACTATGTCTGCGAAACTGCTCTGCAGGAGGTTGAA
GGACTAAAGAAAAGAGAGTCATTGACTCTCATTGTAGAAGGCAAACCTCAAATAAAAATG
ACAAAGAAAACTGATCCCAGTGGACTATCTAAAACAATAATCTGCCATGTGGAAGGTTTT
CCAAAGCCAGCCATTCAATGGACAATTACTGGCAGTGGAAGCGTCATAAACCAAACAGAG
GAATCTCCTTATATTAATGGCAGGTATTATAGTAAAATTATCATTTCCCCTGAAGAGAAT
GTTACATTAACTTGCACAGCAGAAAACCAACTGGAGAGAACAGTAAACTCCTTGAATGTC
TCTGCTATAAGTATTCCAGAACACGATGAGGCAGACGAGATAAGTGATGAAAACAGAGAA
AAGGTGAATGACCAGGCAAAACTAATTGTGGGAATCGTTGTTGGTCTCCTCCTTGCTGCC
CTTGTTGCTGGTGTCGTCTACTGGCTGTACATGAAGAAGTCAAAGACTGCATCAAAACAT
GTAAACAAGGACCTCGGTAATATGGAAGAAAACAAAAAGTTAGAAGAAAACAATCACAAA
ACTGAAGCC

ORF Protein

Cloned ORF protein sequence for pF1KE2008 Download

>KIEE2008  583 aa
MESKGASSCRLLFCLLISATVFRPGLGWYTVNSAYGDTIIIPCRLDVPQNLMFGKWKYEK
PDGSPVFIAFRSSTKKSVQYDDVPEYKDRLNLSENYTLSISNARISDEKRFVCMLVTEDN
VFEAPTIVKVFKQPSKPEIVSKALFLETEQLKKLGDCISEDSYPDGNITWYRNGKVLHPL
EGAVVIIFKKEMDPVTQLYTMTSTLEYKTTKADIQMPFTCSVTYYGPSGQKTIHSEQAVF
DIYYPTEQVTIQVLPPKNAIKEGDNITLKCLGNGNPPPEEFLFYLPGQPEGIRSSNTYTL
TDVRRNATGDYKCSLIDKKSMIASTAITVHYLDLSLNPSGEVTRQIGDALPVSCTISASR
NATVVWMKDNIRLRSSPSFSSLHYQDAGNYVCETALQEVEGLKKRESLTLIVEGKPQIKM
TKKTDPSGLSKTIICHVEGFPKPAIQWTITGSGSVINQTEESPYINGRYYSKIIISPEEN
VTLTCTAENQLERTVNSLNVSAISIPEHDEADEISDENREKVNDQAKLIVGIVVGLLLAA
LVAGVVYWLYMKKSKTASKHVNKDLGNMEENKKLEENNHKTEA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE2008 Download

>pF1KE2008  4862 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAATCCAAG
GGGGCCAGTTCCTGCCGTCTGCTCTTCTGCCTCTTGATCTCCGCCACCGTCTTCAGGCCA
GGCCTTGGATGGTATACTGTAAATTCAGCATATGGAGATACCATTATCATACCTTGCCGA
CTTGACGTACCTCAGAATCTCATGTTTGGCAAATGGAAATATGAAAAGCCCGATGGCTCC
CCAGTATTTATTGCCTTCAGATCCTCTACAAAGAAAAGTGTGCAGTACGACGATGTACCA
GAATACAAAGACAGATTGAACCTCTCAGAAAACTACACTTTGTCTATCAGTAATGCAAGG
ATCAGTGATGAAAAGAGATTTGTGTGCATGCTAGTAACTGAGGACAACGTGTTTGAGGCA
CCTACAATAGTCAAGGTGTTCAAGCAACCATCTAAACCTGAAATTGTAAGCAAAGCACTG
TTTCTCGAAACAGAGCAGCTAAAAAAGTTGGGTGACTGCATTTCAGAAGACAGTTATCCA
GATGGCAATATCACATGGTACAGGAATGGAAAAGTGCTACATCCCCTTGAAGGAGCGGTG
GTCATAATTTTTAAAAAGGAAATGGACCCAGTGACTCAGCTCTATACCATGACTTCCACC
CTGGAGTACAAGACAACCAAGGCTGACATACAAATGCCATTCACCTGCTCGGTGACATAT
TATGGACCATCTGGCCAGAAAACAATTCATTCTGAACAGGCAGTATTTGATATTTACTAT
CCTACAGAGCAGGTGACAATACAAGTGCTGCCACCAAAAAATGCCATCAAAGAAGGGGAT
AACATCACTCTTAAATGCTTAGGGAATGGCAACCCTCCCCCAGAGGAATTTTTGTTTTAC
TTACCAGGACAGCCCGAAGGAATAAGAAGCTCAAATACTTACACACTGACGGATGTGAGG
CGCAATGCAACAGGAGACTACAAGTGTTCCCTGATAGACAAAAAAAGCATGATTGCTTCA
ACAGCCATCACAGTTCACTATTTGGATTTGTCCTTAAACCCAAGTGGAGAAGTGACTAGA
CAGATTGGTGATGCCCTACCCGTGTCATGCACAATATCTGCTAGCAGGAATGCAACTGTG
GTATGGATGAAAGATAACATCAGGCTTCGATCTAGCCCGTCATTTTCTAGTCTTCATTAT
CAGGATGCTGGAAACTATGTCTGCGAAACTGCTCTGCAGGAGGTTGAAGGACTAAAGAAA
AGAGAGTCATTGACTCTCATTGTAGAAGGCAAACCTCAAATAAAAATGACAAAGAAAACT
GATCCCAGTGGACTATCTAAAACAATAATCTGCCATGTGGAAGGTTTTCCAAAGCCAGCC
ATTCAATGGACAATTACTGGCAGTGGAAGCGTCATAAACCAAACAGAGGAATCTCCTTAT
ATTAATGGCAGGTATTATAGTAAAATTATCATTTCCCCTGAAGAGAATGTTACATTAACT
TGCACAGCAGAAAACCAACTGGAGAGAACAGTAAACTCCTTGAATGTCTCTGCTATAAGT
ATTCCAGAACACGATGAGGCAGACGAGATAAGTGATGAAAACAGAGAAAAGGTGAATGAC
CAGGCAAAACTAATTGTGGGAATCGTTGTTGGTCTCCTCCTTGCTGCCCTTGTTGCTGGT
GTCGTCTACTGGCTGTACATGAAGAAGTCAAAGACTGCATCAAAACATGTAAACAAGGAC
CTCGGTAATATGGAAGAAAACAAAAAGTTAGAAGAAAACAATCACAAAACTGAAGCCGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG
CGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGG
GGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA
GGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCG
ACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC
TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGC
CTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTC
GGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCC
ACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA
GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGC
TCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAAC
CACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGG
ATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTC
ACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATA
GTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA
AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG
TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC
CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA
AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA
CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA
ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT
CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG
GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA
AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA
ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC
GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT
TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
AT