THUMPD3 ORF clone pFN21AE1950

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE1950

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Clone info.

Species

human

Clone Name

pFN21AE1950 Sequence (with vector) Restriction Map

Product ID

FHC21416

ORF Sequence

DNA sequence (1521 bp)
Protein sequence (507 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590662]

Gene

KIEE1950

Symbol

THUMPD3

Description

THUMP domain containing 3, transcript variant 1

Original Clone ID

cs02850

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1521 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 507 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2573.1 4.9e-212 100.0 THUMPD3 CCDS1805.2 4.9e-21 27.5 THUMPD2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004114 205 284 PF02926 THUMP IPR000241 297 477 PF01170 Putative RNA methylase HMMSmart IPR004114 188 285 SM00981 THUMP ProfileScan IPR004114 165 285 PS51165 THUMP Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1950 Download

>KIEE1950  1521 bp
ATGTGTGACATTGAAGAAGCCACTAACCAACTCCTAGATGTGAACCTTCATGAGAACCAG
AAGTCTGTACAAGTGACAGAAAGCGACCTCGGAAGTGAATCTGAGCTTCTAGTCACTATT
GGAGCCACTGTACCTACTGGCTTTGAGCAAACAGCTGCAGATGAAGTCAGAGAGAAACTT
GGGTCATCATGCAAAATCAGCAGAGACCGTGGCAAGATATATTTTGTCATTTCAGTGGAA
AGTCTGGCACAGGTTCATTGTCTGAGATCAGTTGATAACTTATTTGTGGTGGTTCAGGAG
TTTCAAGATTACCAGTTCAAACAAACAAAGGAAGAAGTTCTAAAGGATTTTGAAGACTTG
GCTGGAAAACTCCCATGGTCAAACCCCTTAAAAGTGTGGAAAATTAATGCCAGTTTTAAA
AAGAAAAAAGCAAAGCGCAAAAAGATAAATCAGAATTCAAGTAAAGAGAAGATTAATAAT
GGACAAGAAGTCAAAATCGATCAGAGAAATGTTAAAAAAGAGTTCACTAGCCATGCTTTA
GATTCTCATATCTTAGATTATTATGAAAATCCAGCCATCAAAGAGGATGTATCAACATTA
ATAGGTGATGATTTGGCATCTTGCAAAGATGAGACTGATGAAAGCTCAAAAGAAGAAACT
GAGCCTCAAGTGCTGAAGTTTAGAGTCACATGCAACAGGGCAGGAGAGAAACATTGCTTT
ACCTCAAATGAGGCTGCAAGAGATTTTGGGGGTGCTGTTCAAGATTATTTTAAGTGGAAG
GCCGACATGACCAACTTTGATGTGGAGGTTCTTTTGAACATCCATGATAATGAAGTCATT
GTGGGCATTGCATTGACTGAAGAGAGTCTCCACCGAAGAAATATAACACATTTTGGACCT
ACAACTCTTAGATCAACTCTTGCCTATGGGATGCTCAGGCTCTGTGATCCTCTACCTTAT
GATATAATAGTCGATCCAATGTGTGGAACTGGGGCAATACCAATAGAGGGGGCCACTGAA
TGGTCTGACTGTTTCCATATTGCTGGTGATAATAATCCACTGGCTGTGAATAGAGCAGCA
AATAACATTGCATCTTTATTGACCAAGAGCCAAATTAAAGAAGGCAAACCCTCCTGGGGC
TTGCCCATAGATGCTGTTCAGTGGGATATCTGCAATCTGCCATTGAGAACTGGCTCTGTG
GATATTATTGTAACAGATTTGCCATTTGGAAAAAGGATGGGATCCAAGAAGAGAAACTGG
AACCTTTATCCAGCTTGCCTACGGGAGATGAGCCGTGTCTGCACACCTACCACAGGCCGA
GCTGTACTACTTACTCAAGACACAAAATGCTTTACCAAGGCGTTATCTGGAATGCGACAC
GTATGGCGAAAGGTGGATACAGTCTGGGTGAACGTTGGTGGTCTTCGTGCTGCAGTTTAC
GTTCTGATACGTACACCTCAAGCTTTTGTTCATCCTTCAGAACAAGACGGAGAAAGAGGA
ACTCTTTGGCAATGCAAAGAA

ORF Protein

Cloned ORF protein sequence for pFN21AE1950 Download

>KIEE1950  507 aa
MCDIEEATNQLLDVNLHENQKSVQVTESDLGSESELLVTIGATVPTGFEQTAADEVREKL
GSSCKISRDRGKIYFVISVESLAQVHCLRSVDNLFVVVQEFQDYQFKQTKEEVLKDFEDL
AGKLPWSNPLKVWKINASFKKKKAKRKKINQNSSKEKINNGQEVKIDQRNVKKEFTSHAL
DSHILDYYENPAIKEDVSTLIGDDLASCKDETDESSKEETEPQVLKFRVTCNRAGEKHCF
TSNEAARDFGGAVQDYFKWKADMTNFDVEVLLNIHDNEVIVGIALTEESLHRRNITHFGP
TTLRSTLAYGMLRLCDPLPYDIIVDPMCGTGAIPIEGATEWSDCFHIAGDNNPLAVNRAA
NNIASLLTKSQIKEGKPSWGLPIDAVQWDICNLPLRTGSVDIIVTDLPFGKRMGSKKRNW
NLYPACLREMSRVCTPTTGRAVLLTQDTKCFTKALSGMRHVWRKVDTVWVNVGGLRAAVY
VLIRTPQAFVHPSEQDGERGTLWQCKE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1950 Download

>pFN21AE1950  6226 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTGTGACATTGAAGAAGCCACTAACCAACTCCT
AGATGTGAACCTTCATGAGAACCAGAAGTCTGTACAAGTGACAGAAAGCGACCTCGGAAG
TGAATCTGAGCTTCTAGTCACTATTGGAGCCACTGTACCTACTGGCTTTGAGCAAACAGC
TGCAGATGAAGTCAGAGAGAAACTTGGGTCATCATGCAAAATCAGCAGAGACCGTGGCAA
GATATATTTTGTCATTTCAGTGGAAAGTCTGGCACAGGTTCATTGTCTGAGATCAGTTGA
TAACTTATTTGTGGTGGTTCAGGAGTTTCAAGATTACCAGTTCAAACAAACAAAGGAAGA
AGTTCTAAAGGATTTTGAAGACTTGGCTGGAAAACTCCCATGGTCAAACCCCTTAAAAGT
GTGGAAAATTAATGCCAGTTTTAAAAAGAAAAAAGCAAAGCGCAAAAAGATAAATCAGAA
TTCAAGTAAAGAGAAGATTAATAATGGACAAGAAGTCAAAATCGATCAGAGAAATGTTAA
AAAAGAGTTCACTAGCCATGCTTTAGATTCTCATATCTTAGATTATTATGAAAATCCAGC
CATCAAAGAGGATGTATCAACATTAATAGGTGATGATTTGGCATCTTGCAAAGATGAGAC
TGATGAAAGCTCAAAAGAAGAAACTGAGCCTCAAGTGCTGAAGTTTAGAGTCACATGCAA
CAGGGCAGGAGAGAAACATTGCTTTACCTCAAATGAGGCTGCAAGAGATTTTGGGGGTGC
TGTTCAAGATTATTTTAAGTGGAAGGCCGACATGACCAACTTTGATGTGGAGGTTCTTTT
GAACATCCATGATAATGAAGTCATTGTGGGCATTGCATTGACTGAAGAGAGTCTCCACCG
AAGAAATATAACACATTTTGGACCTACAACTCTTAGATCAACTCTTGCCTATGGGATGCT
CAGGCTCTGTGATCCTCTACCTTATGATATAATAGTCGATCCAATGTGTGGAACTGGGGC
AATACCAATAGAGGGGGCCACTGAATGGTCTGACTGTTTCCATATTGCTGGTGATAATAA
TCCACTGGCTGTGAATAGAGCAGCAAATAACATTGCATCTTTATTGACCAAGAGCCAAAT
TAAAGAAGGCAAACCCTCCTGGGGCTTGCCCATAGATGCTGTTCAGTGGGATATCTGCAA
TCTGCCATTGAGAACTGGCTCTGTGGATATTATTGTAACAGATTTGCCATTTGGAAAAAG
GATGGGATCCAAGAAGAGAAACTGGAACCTTTATCCAGCTTGCCTACGGGAGATGAGCCG
TGTCTGCACACCTACCACAGGCCGAGCTGTACTACTTACTCAAGACACAAAATGCTTTAC
CAAGGCGTTATCTGGAATGCGACACGTATGGCGAAAGGTGGATACAGTCTGGGTGAACGT
TGGTGGTCTTCGTGCTGCAGTTTACGTTCTGATACGTACACCTCAAGCTTTTGTTCATCC
TTCAGAACAAGACGGAGAAAGAGGAACTCTTTGGCAATGCAAAGAAGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT