THUMPD2 ORF clone pFN21AE1948

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE1948

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Clone info.

Species

human

Clone Name

pFN21AE1948 Sequence (with vector) Restriction Map

Product ID

FHC20982

ORF Sequence

DNA sequence (1509 bp)
Protein sequence (503 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE1948

Symbol

THUMPD2

Alias : C2orf8

Description

THUMP domain containing 2, transcript variant 1

Original Clone ID

cs02848

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1509 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 503 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS1805.2 1e-171 100.0 THUMPD2 CCDS2573.1 3.8e-17 27.5 THUMPD3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004114 186 256 PF02926 THUMP IPR000241 274 413 PF01170 Putative RNA methylase HMMSmart IPR004114 177 266 SM00981 THUMP ProfileScan IPR004114 161 266 PS51165 THUMP
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_079540 503 611751 100.0 100.0 NP_001308398 410 611751 100.0 81.5 NP_001308399 394 611751 96.1 81.5 XP_016860539 487 611751 96.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1948 Download

>KIEE1948  1509 bp
ATGTCGGAGGCGCGTGGAGAGCCAGGGTCCGGGCCTGAGGCTGGCGCCCGATTCTTCTGC
ACTGCGGGTCGCGGCCTGGAGCCGTTCGTAATGCGAGAGGTGCGGGCGCGGCTGGCGGCC
ACGCAGGTTGAATATATTTCAGGAAAGGTTTTTTTCACCACCTGTTCTGATTTGAATATG
TTGAAGAAATTAAAATCTGCAGAAAGATTATTTTTGCTGATTAAAAAGCAGTTTCCACTT
ATTATTTCTTCTGTAAGTAAAGGAAAAATATTTAATGAAATGCAAAGACTTATAAATGAA
GATCCAGGAAGTTGGTTGAATGCCATTTCAATTTGGAAAAATCTTCTTGAACTTGATGCA
AAAAAGGAAAAACTTTCTCAGAGAGATGATAACCAACTAAAAAGAAAAGTGGGAGAAAAT
GAAATCATTGCAAAGAAATTAAAAATAGAACAAATGCAAAAGATAGAAGAGAATAGGGAC
TGCCAGCTGGAAAAACAAATAAAAGAAGAAACTCTGGAGCAAAGAGATTTTACCACTAAA
AGCGAAAAGTTTCAAGAAGAAGAATTTCAGAATGACATAGAGAAAGCAATTGATACTCAT
AATCAGAATGACTTGACTTTCAGAGTATCTTGTCGCTGCAGTGGAACTATTGGAAAGGCC
TTCACTGCACAGGAGGTAGGAAAAGTAATTGGAATTGCTATTATGAAACACTTTGGATGG
AAAGCAGACTTGAGGAATCCACAATTAGAGATCTTTATACATCTAAATGACATTTACTCT
GTGGTGGGGATTCCTGTGTTCAGGGTTTCCCTAGCCAGCAGAGCTTACATCAAGACAGCT
GGACTGCGATCTACAATAGCGTGGGCAATGGCATCTCTGGCTGACATTAAGGCTGGTGCA
TTTGTTTTAGATCCAATGTGTGGACTTGGAACAATACTTTTGGAAGCTGCTAAAGAATGG
CCAGATGTGTATTATGTAGGTGCTGATGTCAGCGACTCACAGTTACTAGGTACTTGGGAC
AATCTGAAAGCTGCAGGCCTTGAGGATAAAATTGAATTACTTAAAATCTCTGTTATAGAA
TTGCCATTGCCTTCAGAAAGTGTTGATATTATTATTTCTGACATTCCATTTGGGAAAAAG
TTTAAGTTAGGAAAAGACATCAAAAGCATTCTACAAGAAATGGAAAGAGTGCTTCATGTT
GGCGGAACCATTGTATTGTTGCTTAGTGAAGATCACCACAGGCGCCTTACAGATTGTAAA
GAGAGCAACATCCCTTTCAATTCCAAGGACAGTCACACAGATGAACCTGGAATTAAAAAG
TGCTTGAATCCTGAAGAAAAAACTGGTGCATTCAAGACAGCGTCAACTTCATTCGAAGCC
AGTAACCACAAATTCTTAGACAGAATGTCACCATTTGGCTCCTTGGTACCAGTGGAATGC
TACAAAGTTAGCCTTGGAAAGACAGATGCGTTCATATGTAAATATAAGAAGTCGCACTCT
TCTGGACTG

ORF Protein

Cloned ORF protein sequence for pFN21AE1948 Download

>KIEE1948  503 aa
MSEARGEPGSGPEAGARFFCTAGRGLEPFVMREVRARLAATQVEYISGKVFFTTCSDLNM
LKKLKSAERLFLLIKKQFPLIISSVSKGKIFNEMQRLINEDPGSWLNAISIWKNLLELDA
KKEKLSQRDDNQLKRKVGENEIIAKKLKIEQMQKIEENRDCQLEKQIKEETLEQRDFTTK
SEKFQEEEFQNDIEKAIDTHNQNDLTFRVSCRCSGTIGKAFTAQEVGKVIGIAIMKHFGW
KADLRNPQLEIFIHLNDIYSVVGIPVFRVSLASRAYIKTAGLRSTIAWAMASLADIKAGA
FVLDPMCGLGTILLEAAKEWPDVYYVGADVSDSQLLGTWDNLKAAGLEDKIELLKISVIE
LPLPSESVDIIISDIPFGKKFKLGKDIKSILQEMERVLHVGGTIVLLLSEDHHRRLTDCK
ESNIPFNSKDSHTDEPGIKKCLNPEEKTGAFKTASTSFEASNHKFLDRMSPFGSLVPVEC
YKVSLGKTDAFICKYKKSHSSGL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1948 Download

>pFN21AE1948  6214 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCGGAGGCGCGTGGAGAGCCAGGGTCCGGGCC
TGAGGCTGGCGCCCGATTCTTCTGCACTGCGGGTCGCGGCCTGGAGCCGTTCGTAATGCG
AGAGGTGCGGGCGCGGCTGGCGGCCACGCAGGTTGAATATATTTCAGGAAAGGTTTTTTT
CACCACCTGTTCTGATTTGAATATGTTGAAGAAATTAAAATCTGCAGAAAGATTATTTTT
GCTGATTAAAAAGCAGTTTCCACTTATTATTTCTTCTGTAAGTAAAGGAAAAATATTTAA
TGAAATGCAAAGACTTATAAATGAAGATCCAGGAAGTTGGTTGAATGCCATTTCAATTTG
GAAAAATCTTCTTGAACTTGATGCAAAAAAGGAAAAACTTTCTCAGAGAGATGATAACCA
ACTAAAAAGAAAAGTGGGAGAAAATGAAATCATTGCAAAGAAATTAAAAATAGAACAAAT
GCAAAAGATAGAAGAGAATAGGGACTGCCAGCTGGAAAAACAAATAAAAGAAGAAACTCT
GGAGCAAAGAGATTTTACCACTAAAAGCGAAAAGTTTCAAGAAGAAGAATTTCAGAATGA
CATAGAGAAAGCAATTGATACTCATAATCAGAATGACTTGACTTTCAGAGTATCTTGTCG
CTGCAGTGGAACTATTGGAAAGGCCTTCACTGCACAGGAGGTAGGAAAAGTAATTGGAAT
TGCTATTATGAAACACTTTGGATGGAAAGCAGACTTGAGGAATCCACAATTAGAGATCTT
TATACATCTAAATGACATTTACTCTGTGGTGGGGATTCCTGTGTTCAGGGTTTCCCTAGC
CAGCAGAGCTTACATCAAGACAGCTGGACTGCGATCTACAATAGCGTGGGCAATGGCATC
TCTGGCTGACATTAAGGCTGGTGCATTTGTTTTAGATCCAATGTGTGGACTTGGAACAAT
ACTTTTGGAAGCTGCTAAAGAATGGCCAGATGTGTATTATGTAGGTGCTGATGTCAGCGA
CTCACAGTTACTAGGTACTTGGGACAATCTGAAAGCTGCAGGCCTTGAGGATAAAATTGA
ATTACTTAAAATCTCTGTTATAGAATTGCCATTGCCTTCAGAAAGTGTTGATATTATTAT
TTCTGACATTCCATTTGGGAAAAAGTTTAAGTTAGGAAAAGACATCAAAAGCATTCTACA
AGAAATGGAAAGAGTGCTTCATGTTGGCGGAACCATTGTATTGTTGCTTAGTGAAGATCA
CCACAGGCGCCTTACAGATTGTAAAGAGAGCAACATCCCTTTCAATTCCAAGGACAGTCA
CACAGATGAACCTGGAATTAAAAAGTGCTTGAATCCTGAAGAAAAAACTGGTGCATTCAA
GACAGCGTCAACTTCATTCGAAGCCAGTAACCACAAATTCTTAGACAGAATGTCACCATT
TGGCTCCTTGGTACCAGTGGAATGCTACAAAGTTAGCCTTGGAAAGACAGATGCGTTCAT
ATGTAAATATAAGAAGTCGCACTCTTCTGGACTGGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT