OR5M2P ORF clone pFN21AE0822

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE0822

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Clone info.

Species

human

Clone Name

pFN21AE0822 Sequence (with vector) Restriction Map

Product ID

FHC11291

Flexi Clone PID

FXC11291

ORF Sequence

DNA sequence (696 bp)
Protein sequence (232 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529253]

Gene

KIEE0822

Symbol

OR5M2P

Alias : OR11-193

Description

olfactory receptor, family 5, subfamily M, member 2 pseudogene

Original Clone ID

cp01222

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 696 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 232 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31533.1 9.2e-61 71.6 OR5M8 CCDS31532.1 1.7e-59 68.3 OR5M3 CCDS31531.1 6.3e-59 68.3 OR5M9 CCDS53630.1 8.3e-56 60.8 OR5M10 CCDS53631.1 4.1e-55 60.3 OR5M1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000725 12 23 PR00245 Olfactory receptor IPR000725 49 61 PR00245 Olfactory receptor IPR000725 96 112 PR00245 Olfactory receptor IPR000725 156 165 PR00245 Olfactory receptor IPR000725 203 214 PR00245 Olfactory receptor HMMPfam IPR000276 3 209 PF00001 GPCR ProfileScan IPR017452 1 210 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 15 AGCLMQCYVVIAVVLAEHCMLAV 37 PRIMARY 23 2 59 GVCVHLVIVPYVYGFLLSVMETL 81 PRIMARY 23 3 127 NVQSLLIILTSYMFILVAILRS 148 PRIMARY 22 4 190 QGKMVAVFYTTVILMLNSMIYGL 212 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003688 314 608492 48.2 98.3 NP_006628 314 608496 47.1 97.0 NP_001004729 311 615702 43.5 96.1 NP_001005216 311 615016,615082 42.5 97.4 XP_011520809 312 603232 44.1 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0822 Download

>KIEE0822  696 bp
ATGCTAGAAAATTTCTTATCAGAGAAGAAGACCATTTCCTATGCAGGTTGTTTGATGCAG
TGCTATGTTGTCATTGCTGTGGTCCTTGCAGAGCACTGCATGTTGGCAGTCATGGCATAT
GACCGCTATATGGCCATCTGTAATCCATTGCTCTACAGTAGCAAAATGTCCCAAGGTGTT
TGTGTCCACCTGGTCATTGTCCCTTATGTCTATGGCTTTCTTCTCAGTGTGATGGAAACC
TTAAGGACCTACAACCTCTCCTTCTGTGGAACAAATGAAATCAACCATTTCTACTGTGCT
GATCCTCCTCTTATCAAACTGGCATGCTCTGACACGTACAGCAAGGAGCTGTCCATGTAC
ATAGTAGCCGGCTACAGCAACGTCCAGTCTCTTCTGATCATTCTCACATCCTACATGTTC
ATCCTTGTCGCTATCCTCAGAAGCCATTCTGCAGAGGGAAGGAAAAAAGCTTTTTCCACA
TGTGGTTCCCACCTGACAGTTGTCACAATCTTCTATGGAACCCTCTTCTGCATGCATTTG
AGACGTCCCACAGACGAGTCCGTGGAGCAGGGGAAAATGGTGGCTGTGTTTTACACCACA
GTGATACTCATGCTGAACTCCATGATCTATGGCCTCAGGAACAAGGATGTGAAAGAGGCG
TTGAAAAAAGCAATAGGAAAACAAACATTGGGAAAA

ORF Protein

Cloned ORF protein sequence for pFN21AE0822 Download

>KIEE0822  232 aa
MLENFLSEKKTISYAGCLMQCYVVIAVVLAEHCMLAVMAYDRYMAICNPLLYSSKMSQGV
CVHLVIVPYVYGFLLSVMETLRTYNLSFCGTNEINHFYCADPPLIKLACSDTYSKELSMY
IVAGYSNVQSLLIILTSYMFILVAILRSHSAEGRKKAFSTCGSHLTVVTIFYGTLFCMHL
RRPTDESVEQGKMVAVFYTTVILMLNSMIYGLRNKDVKEALKKAIGKQTLGK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0822 Download

>pFN21AE0822  5401 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTAGAAAATTTCTTATCAGAGAAGAAGACCAT
TTCCTATGCAGGTTGTTTGATGCAGTGCTATGTTGTCATTGCTGTGGTCCTTGCAGAGCA
CTGCATGTTGGCAGTCATGGCATATGACCGCTATATGGCCATCTGTAATCCATTGCTCTA
CAGTAGCAAAATGTCCCAAGGTGTTTGTGTCCACCTGGTCATTGTCCCTTATGTCTATGG
CTTTCTTCTCAGTGTGATGGAAACCTTAAGGACCTACAACCTCTCCTTCTGTGGAACAAA
TGAAATCAACCATTTCTACTGTGCTGATCCTCCTCTTATCAAACTGGCATGCTCTGACAC
GTACAGCAAGGAGCTGTCCATGTACATAGTAGCCGGCTACAGCAACGTCCAGTCTCTTCT
GATCATTCTCACATCCTACATGTTCATCCTTGTCGCTATCCTCAGAAGCCATTCTGCAGA
GGGAAGGAAAAAAGCTTTTTCCACATGTGGTTCCCACCTGACAGTTGTCACAATCTTCTA
TGGAACCCTCTTCTGCATGCATTTGAGACGTCCCACAGACGAGTCCGTGGAGCAGGGGAA
AATGGTGGCTGTGTTTTACACCACAGTGATACTCATGCTGAACTCCATGATCTATGGCCT
CAGGAACAAGGATGTGAAAGAGGCGTTGAAAAAAGCAATAGGAAAACAAACATTGGGAAA
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
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