OR5AQ1P ORF clone pFN21AE0813

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Halotag ORF Clone pFN21AE0813

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Clone info.

Species

human

Clone Name

pFN21AE0813 Sequence (with vector) Restriction Map

Product ID

FHC11285

Flexi Clone PID

FXC11285

ORF Sequence

DNA sequence (762 bp)
Protein sequence (254 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529247]

Gene

KIEE0813

Symbol

OR5AQ1P

Alias : OR11-165

Description

olfactory receptor, family 5, subfamily AQ, member 1 pseudogene

Original Clone ID

cp01213

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 762 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 254 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31522.1 8.8e-59 59.9 OR5J2 CCDS31534.1 2.1e-53 49.6 OR5AP2 CCDS31516.1 2.8e-53 53.0 OR5AS1 CCDS31706.1 7.6e-53 53.4 OR8D1 CCDS7949.1 7.7e-53 51.4 OR5I1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 1 13 PR00237 GPCR IPR000725 34 45 PR00245 Olfactory receptor IPR000276 46 68 PR00237 GPCR IPR000725 71 83 PR00245 Olfactory receptor IPR000725 118 134 PR00245 Olfactory receptor IPR000725 178 187 PR00245 Olfactory receptor IPR000276 214 240 PR00237 GPCR IPR000725 225 236 PR00245 Olfactory receptor HMMPfam IPR000276 1 232 PF00001 GPCR ProfileScan IPR017452 1 232 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 5 LGNLSFCDICYSTVFAPKMLVNF 27 SECONDARY 23 2 71 PLLYTVIMAQKVCIQMVLASYLG 93 SECONDARY 23 3 143 VFSGLIAMFTFIVIMVSYICIII 165 PRIMARY 23 4 212 QEKVLAVFYTLVIPMLNPLIYSL 234 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 51.4 97.2 NP_003688 314 608492 49.0 97.2 NP_001004729 311 615702 50.0 96.9 NP_036492 312 603232 43.7 97.2 XP_011520809 312 603232 43.7 97.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0813 Download

>KIEE0813  762 bp
ATGTACTTCTTCCTTGGCAACCTCTCCTTTTGTGATATCTGCTACTCTACTGTCTTTGCT
CCTAAGATGCTAGTCAATTTCCTATCAAAACATAAGTCCAGTACATTTTCTGGCTGTGTT
CTACAGAGTTTCCCTTTTGCAGTATATGTAACCACAAAGGACATTCTCCTGTCCATGATG
GCTTATGACCATTACGTGGCCATAGCTAATCCCTTGTTGTATACAGTCATTATGGCCCAA
AAAGTTTGTATTCAGATGGTCCTTGCTTCTTACTTAGGTGGGCTCATTAATTCCCTGACA
CACACAATAGGTTTGCTCAAATTAGACTTCTGTGGTCCTAATATTGTGAATCATTATTTC
TGTGATGTTCCTCCTCTTCTGAGGCTTTCTTGCTCTGATGCTCATATCAATGAAATGCTG
CCCTTGGTCTTCTCTGGGCTCATTGCAATGTTCACTTTCATTGTCATTATGGTGTCTTAT
ATCTGCATCATCATTGCCATCCAGAGAATCCATGCAGCTGAGGGAAGGTACAAAGCCTTC
TCCACTTGTGTCTCCCACCTAACCACGGTGACCTTATTCTATGGGTCTGTTTCTTTTAGT
TATATCCAGCCAAGTTCTCAGTATTCCTTGGAACAGGAGAAGGTCTTGGCTGTGTTTTAT
ACACTGGTGATCCCCATGCTAAACCCACTTATTTATAGCCTGAGAAATAAGGATGTAAAA
GATGCAGCCAAAAGGTTGATATGGTGGGGGAAAAACCCCACT

ORF Protein

Cloned ORF protein sequence for pFN21AE0813 Download

>KIEE0813  254 aa
MYFFLGNLSFCDICYSTVFAPKMLVNFLSKHKSSTFSGCVLQSFPFAVYVTTKDILLSMM
AYDHYVAIANPLLYTVIMAQKVCIQMVLASYLGGLINSLTHTIGLLKLDFCGPNIVNHYF
CDVPPLLRLSCSDAHINEMLPLVFSGLIAMFTFIVIMVSYICIIIAIQRIHAAEGRYKAF
STCVSHLTTVTLFYGSVSFSYIQPSSQYSLEQEKVLAVFYTLVIPMLNPLIYSLRNKDVK
DAAKRLIWWGKNPT

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0813 Download

>pFN21AE0813  5467 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTACTTCTTCCTTGGCAACCTCTCCTTTTGTGA
TATCTGCTACTCTACTGTCTTTGCTCCTAAGATGCTAGTCAATTTCCTATCAAAACATAA
GTCCAGTACATTTTCTGGCTGTGTTCTACAGAGTTTCCCTTTTGCAGTATATGTAACCAC
AAAGGACATTCTCCTGTCCATGATGGCTTATGACCATTACGTGGCCATAGCTAATCCCTT
GTTGTATACAGTCATTATGGCCCAAAAAGTTTGTATTCAGATGGTCCTTGCTTCTTACTT
AGGTGGGCTCATTAATTCCCTGACACACACAATAGGTTTGCTCAAATTAGACTTCTGTGG
TCCTAATATTGTGAATCATTATTTCTGTGATGTTCCTCCTCTTCTGAGGCTTTCTTGCTC
TGATGCTCATATCAATGAAATGCTGCCCTTGGTCTTCTCTGGGCTCATTGCAATGTTCAC
TTTCATTGTCATTATGGTGTCTTATATCTGCATCATCATTGCCATCCAGAGAATCCATGC
AGCTGAGGGAAGGTACAAAGCCTTCTCCACTTGTGTCTCCCACCTAACCACGGTGACCTT
ATTCTATGGGTCTGTTTCTTTTAGTTATATCCAGCCAAGTTCTCAGTATTCCTTGGAACA
GGAGAAGGTCTTGGCTGTGTTTTATACACTGGTGATCCCCATGCTAAACCCACTTATTTA
TAGCCTGAGAAATAAGGATGTAAAAGATGCAGCCAAAAGGTTGATATGGTGGGGGAAAAA
CCCCACTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT