OR5AQ1P ORF clone FXC11285

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Flexi ORF Clone FXC11285

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Clone info.

Species

human

Clone Name

pF1KE0813 Sequence (with vector) Restriction Map

Product ID

FXC11285

HaloTag Clone PID

FHC11285

ORF Sequence

DNA sequence (762 bp)
Protein sequence (254 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529247]

Gene

KIEE0813

Symbol

OR5AQ1P

Alias : OR11-165

Description

olfactory receptor, family 5, subfamily AQ, member 1 pseudogene

Original Clone ID

cp01213

Features of the cloned ORF sequence

Description

Length: 762 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 254 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31522.1 8.8e-59 59.9 OR5J2 CCDS31534.1 2.1e-53 49.6 OR5AP2 CCDS31516.1 2.8e-53 53.0 OR5AS1 CCDS31706.1 7.6e-53 53.4 OR8D1 CCDS7949.1 7.7e-53 51.4 OR5I1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 1 13 PR00237 GPCR IPR000725 34 45 PR00245 Olfactory receptor IPR000276 46 68 PR00237 GPCR IPR000725 71 83 PR00245 Olfactory receptor IPR000725 118 134 PR00245 Olfactory receptor IPR000725 178 187 PR00245 Olfactory receptor IPR000276 214 240 PR00237 GPCR IPR000725 225 236 PR00245 Olfactory receptor HMMPfam IPR000276 1 232 PF00001 GPCR ProfileScan IPR017452 1 232 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 5 LGNLSFCDICYSTVFAPKMLVNF 27 SECONDARY 23 2 71 PLLYTVIMAQKVCIQMVLASYLG 93 SECONDARY 23 3 143 VFSGLIAMFTFIVIMVSYICIII 165 PRIMARY 23 4 212 QEKVLAVFYTLVIPMLNPLIYSL 234 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 51.4 97.2 NP_003688 314 608492 49.0 97.2 NP_001004729 311 615702 50.0 96.9 NP_036492 312 603232 43.7 97.2 XP_011520809 312 603232 43.7 97.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0813 Download

>KIEE0813  762 bp
ATGTACTTCTTCCTTGGCAACCTCTCCTTTTGTGATATCTGCTACTCTACTGTCTTTGCT
CCTAAGATGCTAGTCAATTTCCTATCAAAACATAAGTCCAGTACATTTTCTGGCTGTGTT
CTACAGAGTTTCCCTTTTGCAGTATATGTAACCACAAAGGACATTCTCCTGTCCATGATG
GCTTATGACCATTACGTGGCCATAGCTAATCCCTTGTTGTATACAGTCATTATGGCCCAA
AAAGTTTGTATTCAGATGGTCCTTGCTTCTTACTTAGGTGGGCTCATTAATTCCCTGACA
CACACAATAGGTTTGCTCAAATTAGACTTCTGTGGTCCTAATATTGTGAATCATTATTTC
TGTGATGTTCCTCCTCTTCTGAGGCTTTCTTGCTCTGATGCTCATATCAATGAAATGCTG
CCCTTGGTCTTCTCTGGGCTCATTGCAATGTTCACTTTCATTGTCATTATGGTGTCTTAT
ATCTGCATCATCATTGCCATCCAGAGAATCCATGCAGCTGAGGGAAGGTACAAAGCCTTC
TCCACTTGTGTCTCCCACCTAACCACGGTGACCTTATTCTATGGGTCTGTTTCTTTTAGT
TATATCCAGCCAAGTTCTCAGTATTCCTTGGAACAGGAGAAGGTCTTGGCTGTGTTTTAT
ACACTGGTGATCCCCATGCTAAACCCACTTATTTATAGCCTGAGAAATAAGGATGTAAAA
GATGCAGCCAAAAGGTTGATATGGTGGGGGAAAAACCCCACT

ORF Protein

Cloned ORF protein sequence for pF1KE0813 Download

>KIEE0813  254 aa
MYFFLGNLSFCDICYSTVFAPKMLVNFLSKHKSSTFSGCVLQSFPFAVYVTTKDILLSMM
AYDHYVAIANPLLYTVIMAQKVCIQMVLASYLGGLINSLTHTIGLLKLDFCGPNIVNHYF
CDVPPLLRLSCSDAHINEMLPLVFSGLIAMFTFIVIMVSYICIIIAIQRIHAAEGRYKAF
STCVSHLTTVTLFYGSVSFSYIQPSSQYSLEQEKVLAVFYTLVIPMLNPLIYSLRNKDVK
DAAKRLIWWGKNPT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0813 Download

>pF1KE0813  3875 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTACTTCTTC
CTTGGCAACCTCTCCTTTTGTGATATCTGCTACTCTACTGTCTTTGCTCCTAAGATGCTA
GTCAATTTCCTATCAAAACATAAGTCCAGTACATTTTCTGGCTGTGTTCTACAGAGTTTC
CCTTTTGCAGTATATGTAACCACAAAGGACATTCTCCTGTCCATGATGGCTTATGACCAT
TACGTGGCCATAGCTAATCCCTTGTTGTATACAGTCATTATGGCCCAAAAAGTTTGTATT
CAGATGGTCCTTGCTTCTTACTTAGGTGGGCTCATTAATTCCCTGACACACACAATAGGT
TTGCTCAAATTAGACTTCTGTGGTCCTAATATTGTGAATCATTATTTCTGTGATGTTCCT
CCTCTTCTGAGGCTTTCTTGCTCTGATGCTCATATCAATGAAATGCTGCCCTTGGTCTTC
TCTGGGCTCATTGCAATGTTCACTTTCATTGTCATTATGGTGTCTTATATCTGCATCATC
ATTGCCATCCAGAGAATCCATGCAGCTGAGGGAAGGTACAAAGCCTTCTCCACTTGTGTC
TCCCACCTAACCACGGTGACCTTATTCTATGGGTCTGTTTCTTTTAGTTATATCCAGCCA
AGTTCTCAGTATTCCTTGGAACAGGAGAAGGTCTTGGCTGTGTTTTATACACTGGTGATC
CCCATGCTAAACCCACTTATTTATAGCCTGAGAAATAAGGATGTAAAAGATGCAGCCAAA
AGGTTGATATGGTGGGGGAAAAACCCCACTGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT