HMGXB4 ORF clone pFN21AB9544

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB9544

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Clone info.

Species

human

Clone Name

pFN21AB9544 Sequence (with vector) Restriction Map

Product ID

FHC03153

Flexi Clone PID

FXC03153

ORF Sequence

DNA sequence (1803 bp)
Protein sequence (601 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463067]

Gene

KIBB9544

Symbol

HMGXB4

Alias : HMG2L1, HMGBCG, P53N, THC211630

Description

HMG box domain containing 4, transcript variant 1

Original Clone ID

oc00042

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1803 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 601 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33641.1 4.5e-154 100.0 HMGXB4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000910 408 469 PF00505 High mobility group HMMSmart IPR000910 406 476 SM00398 High mobility group ProfileScan IPR000910 407 475 PS50118 High mobility group
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001003681 601 604702 100.0 100.0 XP_006724163 644 604702 99.2 99.5 XP_006724164 603 604702 99.1 90.3 XP_006724165 492 604702 100.0 81.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9544 Download

>KIBB9544  1803 bp
ATGGCTTATGATGACTCCGTGAAGAAAGAAGATTGTTTTGATGGTGATCATACCTTTGAG
GACATAGGACTTGCAGCTGGCCGAAGCCAACGAGAGAAAAAACGTTCTTACAAAGATTTT
TTAAGGGAAGAGGAAGAAATTGCTGCTCAGGTCAGGAATTCTTCCAAGAAGAAGTTGAAG
GATAGTGAACTTTACTTCTTGGGGACGGACACACACAAGAAGAAGAGGAAGCACTCCTCT
GATGATTACTACTATGGAGATATTTCGTCTTTGGAATCGTCACAGAAGAAAAAGAAAAAG
TCCAGCCCACAGTCTACTGATACAGCTATGGACCTGTTGAAAGCTATCACTTCCCCACTG
GCAGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGAGAAATCCTCTGGCTCTTCAAGCCAT
TCGGAGAGTAAAAAGGAGCACCACAGGAAGAAAGTCAGTGGAAGCAGTGGGGAACTACCC
CTAGAGGATGGTGGCTCCCACAAATCGAAAAAAATGAAACCTCTCTATGTGAACACAGAG
ACACTGACCCTTCGGGAGCCTGATGGTTTAAAAATGAAACTTATTCTGTCACCAAAGGAG
AAGGGAAGCAGCTCTGTTGATGAGGAGTCTTTTCAATATCCCTCCCAACAAGCGACTGTG
AAAAAATCCTCAAAGAAATCAGCTCGGGATGAGCAGGGTGCTTTACTCCTAGGACATGAG
TTACAGAGCTTTCTGAAAACAGCCCGGAAAAAGCACAAGTCATCCTCAGACGCACATTCA
TCTCCTGGCCCTGAAGGCTGTGGGTCTGACGCCTCCCAGTTCGCAGAGTCCCACAGTGCT
AACCTTGATCTTTCAGGGCTTGAACCTATTCTGGTAGAATCAGACTCATCCTCTGGTGGG
GAACTAGAGGCTGGGGAGTTAGTGATAGATGATTCTTACCGAGAAATCAAGAAGAAAAAG
AAGTCAAAGAAGAGCAAAAAGAAGAAAGACAAGGAGAAGCATAAAGAGAAGCGACACTCC
AAGTCCAAGAGAAGTTTAGGACTTTCTGCCGTGCCAGTGGGAGAGGTCACAGTGACATCT
GGCCCTCCTCCCAGCATCCCATACGCTGGAGCAGCAGCACCTCCCCTGCCACTTCCTGGC
CTCCACACAGATGGGCATAGTGAAAAAAAAAAGAAAAAAGAAGAGAAGGACAAAGAGAGA
GAGAGAGGAGAAAAGCCAAAAAAGAAGAACATGTCGGCCTACCAGGTGTTCTGTAAAGAG
TATCGCGTGACCATTGTGGCTGACCATCCAGGTATAGATTTTGGGGAACTTAGTAAAAAA
CTGGCTGAGGTGTGGAAGCAATTACCAGAAAAAGACAAACTGATTTGGAAGCAAAAAGCT
CAGTATCTGCAGCACAAACAGAACAAAGCAGAAGCCACAACTGTGAAAAGGAAAGCATCC
AGCTCAGAAGGTTCCATGAAAGTCAAAGCCTCTTCTGTAGGAGTACTGTCACCCCAGAAG
AAGTCCCCACCCACCACCATGCTGTTACCAGCCTCACCAGCCAAAGCCCCTGAGACAGAG
CCCATTGATGTTGCTGCTCATCTTCAGCTGTTGGGAGAGTCCCTAAGCCTCATTGGACAC
CGTCTGCAGGAAACTGAGGGTATGGTGGCTGTGTCTGGCAGTTTGTCAGTGCTTCTGGAT
TCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCTCACCACACAACTACCTGAATTGAAT
GGCTGTCCCAAACAGGTCTTGTCAAACACATTAGACAACATTGCTTACATCATGCCGGGA
CTG

ORF Protein

Cloned ORF protein sequence for pFN21AB9544 Download

>KIBB9544  601 aa
MAYDDSVKKEDCFDGDHTFEDIGLAAGRSQREKKRSYKDFLREEEEIAAQVRNSSKKKLK
DSELYFLGTDTHKKKRKHSSDDYYYGDISSLESSQKKKKKSSPQSTDTAMDLLKAITSPL
AAGSKPSKKTGEKSSGSSSHSESKKEHHRKKVSGSSGELPLEDGGSHKSKKMKPLYVNTE
TLTLREPDGLKMKLILSPKEKGSSSVDEESFQYPSQQATVKKSSKKSARDEQGALLLGHE
LQSFLKTARKKHKSSSDAHSSPGPEGCGSDASQFAESHSANLDLSGLEPILVESDSSSGG
ELEAGELVIDDSYREIKKKKKSKKSKKKKDKEKHKEKRHSKSKRSLGLSAVPVGEVTVTS
GPPPSIPYAGAAAPPLPLPGLHTDGHSEKKKKKEEKDKERERGEKPKKKNMSAYQVFCKE
YRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKAS
SSEGSMKVKASSVGVLSPQKKSPPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGH
RLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPG
L

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9544 Download

>pFN21AB9544  6508 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTTATGATGACTCCGTGAAGAAAGAAGATTG
TTTTGATGGTGATCATACCTTTGAGGACATAGGACTTGCAGCTGGCCGAAGCCAACGAGA
GAAAAAACGTTCTTACAAAGATTTTTTAAGGGAAGAGGAAGAAATTGCTGCTCAGGTCAG
GAATTCTTCCAAGAAGAAGTTGAAGGATAGTGAACTTTACTTCTTGGGGACGGACACACA
CAAGAAGAAGAGGAAGCACTCCTCTGATGATTACTACTATGGAGATATTTCGTCTTTGGA
ATCGTCACAGAAGAAAAAGAAAAAGTCCAGCCCACAGTCTACTGATACAGCTATGGACCT
GTTGAAAGCTATCACTTCCCCACTGGCAGCAGGCTCCAAGCCCTCCAAAAAGACTGGGGA
GAAATCCTCTGGCTCTTCAAGCCATTCGGAGAGTAAAAAGGAGCACCACAGGAAGAAAGT
CAGTGGAAGCAGTGGGGAACTACCCCTAGAGGATGGTGGCTCCCACAAATCGAAAAAAAT
GAAACCTCTCTATGTGAACACAGAGACACTGACCCTTCGGGAGCCTGATGGTTTAAAAAT
GAAACTTATTCTGTCACCAAAGGAGAAGGGAAGCAGCTCTGTTGATGAGGAGTCTTTTCA
ATATCCCTCCCAACAAGCGACTGTGAAAAAATCCTCAAAGAAATCAGCTCGGGATGAGCA
GGGTGCTTTACTCCTAGGACATGAGTTACAGAGCTTTCTGAAAACAGCCCGGAAAAAGCA
CAAGTCATCCTCAGACGCACATTCATCTCCTGGCCCTGAAGGCTGTGGGTCTGACGCCTC
CCAGTTCGCAGAGTCCCACAGTGCTAACCTTGATCTTTCAGGGCTTGAACCTATTCTGGT
AGAATCAGACTCATCCTCTGGTGGGGAACTAGAGGCTGGGGAGTTAGTGATAGATGATTC
TTACCGAGAAATCAAGAAGAAAAAGAAGTCAAAGAAGAGCAAAAAGAAGAAAGACAAGGA
GAAGCATAAAGAGAAGCGACACTCCAAGTCCAAGAGAAGTTTAGGACTTTCTGCCGTGCC
AGTGGGAGAGGTCACAGTGACATCTGGCCCTCCTCCCAGCATCCCATACGCTGGAGCAGC
AGCACCTCCCCTGCCACTTCCTGGCCTCCACACAGATGGGCATAGTGAAAAAAAAAAGAA
AAAAGAAGAGAAGGACAAAGAGAGAGAGAGAGGAGAAAAGCCAAAAAAGAAGAACATGTC
GGCCTACCAGGTGTTCTGTAAAGAGTATCGCGTGACCATTGTGGCTGACCATCCAGGTAT
AGATTTTGGGGAACTTAGTAAAAAACTGGCTGAGGTGTGGAAGCAATTACCAGAAAAAGA
CAAACTGATTTGGAAGCAAAAAGCTCAGTATCTGCAGCACAAACAGAACAAAGCAGAAGC
CACAACTGTGAAAAGGAAAGCATCCAGCTCAGAAGGTTCCATGAAAGTCAAAGCCTCTTC
TGTAGGAGTACTGTCACCCCAGAAGAAGTCCCCACCCACCACCATGCTGTTACCAGCCTC
ACCAGCCAAAGCCCCTGAGACAGAGCCCATTGATGTTGCTGCTCATCTTCAGCTGTTGGG
AGAGTCCCTAAGCCTCATTGGACACCGTCTGCAGGAAACTGAGGGTATGGTGGCTGTGTC
TGGCAGTTTGTCAGTGCTTCTGGATTCCATTATCTGTGCCCTTGGCCCCTTGGCATGTCT
CACCACACAACTACCTGAATTGAATGGCTGTCCCAAACAGGTCTTGTCAAACACATTAGA
CAACATTGCTTACATCATGCCGGGACTGGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT