SRPX2 ORF clone pFN21AB5607

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB5607

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Clone info.

Species

human

Clone Name

pFN21AB5607 Sequence (with vector) Restriction Map

Product ID

FHC03570

Flexi Clone PID

FXC03570

ORF Sequence

DNA sequence (1395 bp)
Protein sequence (465 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527647]

Gene

KIBB5607

Symbol

SRPX2

Alias : BPP, CBPS, PMGX, RESDX, SRPUL

Description

sushi-repeat containing protein, X-linked 2

Original Clone ID

eg01318

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1395 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 465 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14471.1 4.3e-192 100.0 SRPX2 CCDS14245.1 4.6e-87 45.9 SRPX CCDS55400.1 6.2e-86 47.1 SRPX CCDS55402.1 1.2e-70 47.7 SRPX CCDS55401.1 5.5e-67 47.8 SRPX The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000436 79 114 PF00084 Sushi/SCR/CCP IPR000436 122 176 PF00084 Sushi/SCR/CCP IPR003410 177 259 PF02494 Hyalin IPR000436 264 319 PF00084 Sushi/SCR/CCP HMMSmart IPR000436 59 117 SM00032 Sushi/SCR/CCP IPR000436 122 176 SM00032 Sushi/SCR/CCP IPR000436 264 319 SM00032 Sushi/SCR/CCP ProfileScan IPR000436 69 119 PS50923 Sushi/SCR/CCP IPR000436 120 178 PS50923 Sushi/SCR/CCP IPR003410 177 261 PS50825 Hyalin IPR000436 262 321 PS50923 Sushi/SCR/CCP
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055282 465 300642,300643 100.0 100.0 NP_006298 464 300187 45.9 97.2 NP_001164221 444 300187 47.1 90.3 XP_016885382 419 300187 47.3 86.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5607 Download

>KIBB5607  1395 bp
ATGGCCAGTCAGCTAACTCAAAGAGGAGCTCTCTTTCTGCTGTTCTTCCTAACTCCGGCA
GTGACACCAACATGGTATGCAGGTTCTGGCTACTATCCGGATGAAAGCTACAATGAAGTA
TATGCAGAGGAGGTCCCACAGGCTCCTGCCCTGGACTACCGAGTCCCCCGATGGTGTTAT
ACATTAAATATCCAGGATGGAGAAGCCACATGCTACTCACCGAAGGGAGGAAATTATCAC
AGCAGCCTGGGCACGCGTTGTGAGCTCTCCTGTGACCGGGGCTTTCGATTGATTGGAAGG
AGGTCGGTGCAATGCCTGCCAAGCCGTCGTTGGTCTGGAACTGCCTACTGCAGGCAGATG
AGATGCCACGCACTACCATTCATCACTAGTGGCACTTACACCTGCACAAATGGAGTGCTT
CTTGACTCTCGCTGTGACTACAGCTGTTCCAGTGGCTACCACCTGGAAGGTGATCGCAGC
CGAATCTGCATGGAAGATGGGAGATGGAGTGGAGGCGAGCCTGTATGTGTAGACATAGAT
CCCCCCAAGATCCGCTGTCCCCACTCACGTGAGAAGATGGCAGAGCCAGAGAAATTGACT
GCTCGAGTATACTGGGACCCACCGTTGGTGAAAGATTCTGCTGATGGTACCATCACCAGG
GTGACACTTCGGGGCCCTGAGCCTGGCTCTCACTTTCCCGAAGGAGAGCATGTGATTCGT
TACACTGCCTATGACCGAGCCTACAACCGGGCCAGCTGCAAGTTCATTGTGAAAGTACAA
GTGAGACGCTGCCCAACTCTGAAACCTCCGCAGCACGGCTACCTCACCTGCACCTCAGCG
GGGGACAACTATGGTGCCACCTGTGAATACCACTGTGATGGCGGTTATGATCGCCAGGGG
ACACCCTCCCGGGTCTGTCAGTCCAGCCGCCAGTGGTCAGGTTCACCACCAATCTGTGCT
CCTATGAAGATTAACGTCAACGTCAACTCAGCTGCTGGTCTCTTGGATCAATTCTATGAG
AAACAGCGACTCCTCATCATCTCAGCTCCTGATCCTTCCAACCGATATTATAAAATGCAG
ATCTCTATGCTACAGCAATCCACCTGTGGACTGGATTTGCGGCATGTGACCATCATTGAA
CTGGTGGGACAGCCACCTCAGGAGGTGGGGCGCATCCGGGAGCAACAGCTGTCAGCCAAC
ATCATCGAGGAGCTCAGGCAATTTCAGCGCCTCACTCGCTCCTACTTCAACATGGTGTTG
ATTGACAAGCAGGGTATTGACCGAGACCGCTACATGGAACCTGTCACCCCCGAGGAAATC
TTCACATTCATTGATGACTACCTACTGAGCAATCAGGAGTTGACCCAGCGTCGGGAGCAA
AGGGACATATGCGAG

ORF Protein

Cloned ORF protein sequence for pFN21AB5607 Download

>KIBB5607  465 aa
MASQLTQRGALFLLFFLTPAVTPTWYAGSGYYPDESYNEVYAEEVPQAPALDYRVPRWCY
TLNIQDGEATCYSPKGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTAYCRQM
RCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPVCVDID
PPKIRCPHSREKMAEPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEGEHVIR
YTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGGYDRQG
TPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNRYYKMQ
ISMLQQSTCGLDLRHVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSYFNMVL
IDKQGIDRDRYMEPVTPEEIFTFIDDYLLSNQELTQRREQRDICE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5607 Download

>pFN21AB5607  6100 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCAGTCAGCTAACTCAAAGAGGAGCTCTCTT
TCTGCTGTTCTTCCTAACTCCGGCAGTGACACCAACATGGTATGCAGGTTCTGGCTACTA
TCCGGATGAAAGCTACAATGAAGTATATGCAGAGGAGGTCCCACAGGCTCCTGCCCTGGA
CTACCGAGTCCCCCGATGGTGTTATACATTAAATATCCAGGATGGAGAAGCCACATGCTA
CTCACCGAAGGGAGGAAATTATCACAGCAGCCTGGGCACGCGTTGTGAGCTCTCCTGTGA
CCGGGGCTTTCGATTGATTGGAAGGAGGTCGGTGCAATGCCTGCCAAGCCGTCGTTGGTC
TGGAACTGCCTACTGCAGGCAGATGAGATGCCACGCACTACCATTCATCACTAGTGGCAC
TTACACCTGCACAAATGGAGTGCTTCTTGACTCTCGCTGTGACTACAGCTGTTCCAGTGG
CTACCACCTGGAAGGTGATCGCAGCCGAATCTGCATGGAAGATGGGAGATGGAGTGGAGG
CGAGCCTGTATGTGTAGACATAGATCCCCCCAAGATCCGCTGTCCCCACTCACGTGAGAA
GATGGCAGAGCCAGAGAAATTGACTGCTCGAGTATACTGGGACCCACCGTTGGTGAAAGA
TTCTGCTGATGGTACCATCACCAGGGTGACACTTCGGGGCCCTGAGCCTGGCTCTCACTT
TCCCGAAGGAGAGCATGTGATTCGTTACACTGCCTATGACCGAGCCTACAACCGGGCCAG
CTGCAAGTTCATTGTGAAAGTACAAGTGAGACGCTGCCCAACTCTGAAACCTCCGCAGCA
CGGCTACCTCACCTGCACCTCAGCGGGGGACAACTATGGTGCCACCTGTGAATACCACTG
TGATGGCGGTTATGATCGCCAGGGGACACCCTCCCGGGTCTGTCAGTCCAGCCGCCAGTG
GTCAGGTTCACCACCAATCTGTGCTCCTATGAAGATTAACGTCAACGTCAACTCAGCTGC
TGGTCTCTTGGATCAATTCTATGAGAAACAGCGACTCCTCATCATCTCAGCTCCTGATCC
TTCCAACCGATATTATAAAATGCAGATCTCTATGCTACAGCAATCCACCTGTGGACTGGA
TTTGCGGCATGTGACCATCATTGAACTGGTGGGACAGCCACCTCAGGAGGTGGGGCGCAT
CCGGGAGCAACAGCTGTCAGCCAACATCATCGAGGAGCTCAGGCAATTTCAGCGCCTCAC
TCGCTCCTACTTCAACATGGTGTTGATTGACAAGCAGGGTATTGACCGAGACCGCTACAT
GGAACCTGTCACCCCCGAGGAAATCTTCACATTCATTGATGACTACCTACTGAGCAATCA
GGAGTTGACCCAGCGTCGGGAGCAAAGGGACATATGCGAGGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT