SRPX2 ORF clone FXC03570

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Flexi ORF Clone FXC03570

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Clone info.

Species

human

Clone Name

pF1KB5607 Sequence (with vector) Restriction Map

Product ID

FXC03570

HaloTag Clone PID

FHC03570

ORF Sequence

DNA sequence (1395 bp)
Protein sequence (465 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527647]

Gene

KIBB5607

Symbol

SRPX2

Alias : BPP, CBPS, PMGX, RESDX, SRPUL

Description

sushi-repeat containing protein, X-linked 2

Original Clone ID

eg01318

Features of the cloned ORF sequence

Description

Length: 1395 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 465 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14471.1 4.3e-192 100.0 SRPX2 CCDS14245.1 4.6e-87 45.9 SRPX CCDS55400.1 6.2e-86 47.1 SRPX CCDS55402.1 1.2e-70 47.7 SRPX CCDS55401.1 5.5e-67 47.8 SRPX The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000436 79 114 PF00084 Sushi/SCR/CCP IPR000436 122 176 PF00084 Sushi/SCR/CCP IPR003410 177 259 PF02494 Hyalin IPR000436 264 319 PF00084 Sushi/SCR/CCP HMMSmart IPR000436 59 117 SM00032 Sushi/SCR/CCP IPR000436 122 176 SM00032 Sushi/SCR/CCP IPR000436 264 319 SM00032 Sushi/SCR/CCP ProfileScan IPR000436 69 119 PS50923 Sushi/SCR/CCP IPR000436 120 178 PS50923 Sushi/SCR/CCP IPR003410 177 261 PS50825 Hyalin IPR000436 262 321 PS50923 Sushi/SCR/CCP
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055282 465 300642,300643 100.0 100.0 NP_006298 464 300187 45.9 97.2 NP_001164221 444 300187 47.1 90.3 XP_016885382 419 300187 47.3 86.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5607 Download

>KIBB5607  1395 bp
ATGGCCAGTCAGCTAACTCAAAGAGGAGCTCTCTTTCTGCTGTTCTTCCTAACTCCGGCA
GTGACACCAACATGGTATGCAGGTTCTGGCTACTATCCGGATGAAAGCTACAATGAAGTA
TATGCAGAGGAGGTCCCACAGGCTCCTGCCCTGGACTACCGAGTCCCCCGATGGTGTTAT
ACATTAAATATCCAGGATGGAGAAGCCACATGCTACTCACCGAAGGGAGGAAATTATCAC
AGCAGCCTGGGCACGCGTTGTGAGCTCTCCTGTGACCGGGGCTTTCGATTGATTGGAAGG
AGGTCGGTGCAATGCCTGCCAAGCCGTCGTTGGTCTGGAACTGCCTACTGCAGGCAGATG
AGATGCCACGCACTACCATTCATCACTAGTGGCACTTACACCTGCACAAATGGAGTGCTT
CTTGACTCTCGCTGTGACTACAGCTGTTCCAGTGGCTACCACCTGGAAGGTGATCGCAGC
CGAATCTGCATGGAAGATGGGAGATGGAGTGGAGGCGAGCCTGTATGTGTAGACATAGAT
CCCCCCAAGATCCGCTGTCCCCACTCACGTGAGAAGATGGCAGAGCCAGAGAAATTGACT
GCTCGAGTATACTGGGACCCACCGTTGGTGAAAGATTCTGCTGATGGTACCATCACCAGG
GTGACACTTCGGGGCCCTGAGCCTGGCTCTCACTTTCCCGAAGGAGAGCATGTGATTCGT
TACACTGCCTATGACCGAGCCTACAACCGGGCCAGCTGCAAGTTCATTGTGAAAGTACAA
GTGAGACGCTGCCCAACTCTGAAACCTCCGCAGCACGGCTACCTCACCTGCACCTCAGCG
GGGGACAACTATGGTGCCACCTGTGAATACCACTGTGATGGCGGTTATGATCGCCAGGGG
ACACCCTCCCGGGTCTGTCAGTCCAGCCGCCAGTGGTCAGGTTCACCACCAATCTGTGCT
CCTATGAAGATTAACGTCAACGTCAACTCAGCTGCTGGTCTCTTGGATCAATTCTATGAG
AAACAGCGACTCCTCATCATCTCAGCTCCTGATCCTTCCAACCGATATTATAAAATGCAG
ATCTCTATGCTACAGCAATCCACCTGTGGACTGGATTTGCGGCATGTGACCATCATTGAA
CTGGTGGGACAGCCACCTCAGGAGGTGGGGCGCATCCGGGAGCAACAGCTGTCAGCCAAC
ATCATCGAGGAGCTCAGGCAATTTCAGCGCCTCACTCGCTCCTACTTCAACATGGTGTTG
ATTGACAAGCAGGGTATTGACCGAGACCGCTACATGGAACCTGTCACCCCCGAGGAAATC
TTCACATTCATTGATGACTACCTACTGAGCAATCAGGAGTTGACCCAGCGTCGGGAGCAA
AGGGACATATGCGAG

ORF Protein

Cloned ORF protein sequence for pF1KB5607 Download

>KIBB5607  465 aa
MASQLTQRGALFLLFFLTPAVTPTWYAGSGYYPDESYNEVYAEEVPQAPALDYRVPRWCY
TLNIQDGEATCYSPKGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTAYCRQM
RCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPVCVDID
PPKIRCPHSREKMAEPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEGEHVIR
YTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGGYDRQG
TPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNRYYKMQ
ISMLQQSTCGLDLRHVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSYFNMVL
IDKQGIDRDRYMEPVTPEEIFTFIDDYLLSNQELTQRREQRDICE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5607 Download

>pF1KB5607  4508 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCAGTCAG
CTAACTCAAAGAGGAGCTCTCTTTCTGCTGTTCTTCCTAACTCCGGCAGTGACACCAACA
TGGTATGCAGGTTCTGGCTACTATCCGGATGAAAGCTACAATGAAGTATATGCAGAGGAG
GTCCCACAGGCTCCTGCCCTGGACTACCGAGTCCCCCGATGGTGTTATACATTAAATATC
CAGGATGGAGAAGCCACATGCTACTCACCGAAGGGAGGAAATTATCACAGCAGCCTGGGC
ACGCGTTGTGAGCTCTCCTGTGACCGGGGCTTTCGATTGATTGGAAGGAGGTCGGTGCAA
TGCCTGCCAAGCCGTCGTTGGTCTGGAACTGCCTACTGCAGGCAGATGAGATGCCACGCA
CTACCATTCATCACTAGTGGCACTTACACCTGCACAAATGGAGTGCTTCTTGACTCTCGC
TGTGACTACAGCTGTTCCAGTGGCTACCACCTGGAAGGTGATCGCAGCCGAATCTGCATG
GAAGATGGGAGATGGAGTGGAGGCGAGCCTGTATGTGTAGACATAGATCCCCCCAAGATC
CGCTGTCCCCACTCACGTGAGAAGATGGCAGAGCCAGAGAAATTGACTGCTCGAGTATAC
TGGGACCCACCGTTGGTGAAAGATTCTGCTGATGGTACCATCACCAGGGTGACACTTCGG
GGCCCTGAGCCTGGCTCTCACTTTCCCGAAGGAGAGCATGTGATTCGTTACACTGCCTAT
GACCGAGCCTACAACCGGGCCAGCTGCAAGTTCATTGTGAAAGTACAAGTGAGACGCTGC
CCAACTCTGAAACCTCCGCAGCACGGCTACCTCACCTGCACCTCAGCGGGGGACAACTAT
GGTGCCACCTGTGAATACCACTGTGATGGCGGTTATGATCGCCAGGGGACACCCTCCCGG
GTCTGTCAGTCCAGCCGCCAGTGGTCAGGTTCACCACCAATCTGTGCTCCTATGAAGATT
AACGTCAACGTCAACTCAGCTGCTGGTCTCTTGGATCAATTCTATGAGAAACAGCGACTC
CTCATCATCTCAGCTCCTGATCCTTCCAACCGATATTATAAAATGCAGATCTCTATGCTA
CAGCAATCCACCTGTGGACTGGATTTGCGGCATGTGACCATCATTGAACTGGTGGGACAG
CCACCTCAGGAGGTGGGGCGCATCCGGGAGCAACAGCTGTCAGCCAACATCATCGAGGAG
CTCAGGCAATTTCAGCGCCTCACTCGCTCCTACTTCAACATGGTGTTGATTGACAAGCAG
GGTATTGACCGAGACCGCTACATGGAACCTGTCACCCCCGAGGAAATCTTCACATTCATT
GATGACTACCTACTGAGCAATCAGGAGTTGACCCAGCGTCGGGAGCAAAGGGACATATGC
GAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT