COLGALT2 ORF clone pFN21AA0584

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Halotag ORF Clone pFN21AA0584

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Clone info.

Species

human

Clone Name

pFN21AA0584 Sequence (with vector) Restriction Map

Product ID

FHC00102

Flexi Clone PID

FXC00102

ORF Sequence

DNA sequence (1878 bp)
Protein sequence (626 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385353]

Gene

KIAA0584

Symbol

COLGALT2

Alias : C1orf17, ColGalT 2, GLT25D2

Description

collagen beta(1-O)galactosyltransferase 2, transcript variant 1

Original Clone ID

hj00933

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1878 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 626 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS1360.1 0 100.0 COLGALT2 CCDS12363.1 1.1e-182 66.8 COLGALT1 CCDS6901.2 2.7e-138 52.8 CERCAM CCDS69675.1 1.2e-119 50.7 CERCAM CCDS3131.1 7.4e-14 29.4 PLOD2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002654 342 525 PF01755 Glycosyl transferase
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016870283 595 616626 52.8 92.7 XP_005252092 595 616626 52.8 92.7 XP_011517064 595 616626 52.8 92.7 NP_057258 595 616626 52.8 92.7 NP_001273689 517 616626 50.7 84.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AA0584 Download

>KIAA0584  1878 bp
ATGGCTGCGCGCCCTGCTGCCACCCTCGCCTGGTCGCTACTGCTCCTCTCCTCAGCCCTG
CTCCGCGAAGGCTGCCGAGCGCGCTTCGTCGCCGAGCGGGACTCGGAGGACGACGGAGAG
GAGCCGGTGGTTTTCCCGGAGTCGCCCCTGCAGAGCCCCACGGTGCTCGTGGCGGTCCTC
GCCCGCAACGCGGCGCACACGCTGCCGCACTTCCTCGGCTGCCTGGAGCGGCTGGACTAC
CCCAAGAGCAGGATGGCCATCTGGGCAGCCACTGATCACAATGTGGATAATACAACAGAA
ATATTCAGGGAGTGGTTGAAAAATGTACAGAGACTCTATCACTATGTGGAGTGGAGGCCT
ATGGATGAACCAGAGTCTTACCCTGATGAAATTGGACCAAAGCACTGGCCAACCTCCCGG
TTTGCCCATGTGATGAAACTACGACAGGCAGCCCTTCGAACTGCGAGGGAAAAATGGTCA
GACTACATTCTGTTCATAGATGTTGACAATTTCCTGACTAATCCACAGACCCTCAATCTA
CTGATTGCAGAAAACAAAACTATTGTGGCCCCCATGCTGGAGTCTCGGGGCCTGTATTCT
AATTTCTGGTGCGGAATCACCCCTAAGGGCTTCTATAAGAGGACCCCAGACTACGTTCAG
ATTCGAGAATGGAAGAGGACAGGCTGCTTCCCCGTCCCCATGGTCCACTCCACCTTCCTA
ATTGACCTCAGGAAGGAGGCCTCGGACAAGCTGACTTTCTACCCCCCACACCAGGACTAC
ACCTGGACCTTTGATGACATCATTGTCTTTGCCTTCTCCAGCAGGCAAGCAGGCATCCAG
ATGTACCTCTGCAACAGAGAGCACTATGGCTACCTGCCCATCCCCCTGAAGCCCCATCAG
ACACTGCAGGAAGACATCGAGAACCTCATCCATGTGCAGATTGAAGCAATGATTGACCGT
CCTCCAATGGAACCCTCCCAGTATGTCTCAGTTGTCCCTAAATATCCAGACAAGATGGGA
TTTGATGAGATTTTCATGATAAACCTCAAACGCAGAAAGGACAGGCGGGACCGGATGCTG
CGCACACTGTATGAACAGGAGATTGAGGTCAAGATTGTCGAGGCTGTGGATGGAAAGGCA
CTCAACACAAGCCAGCTGAAGGCACTGAATATTGAAATGCTGCCTGGCTATCGAGATCCC
TATTCCTCCAGGCCTCTAACAAGGGGTGAAATCGGCTGCTTTCTCAGCCACTACTCAGTC
TGGAAAGAGGTAATTGATCGAGAGCTAGAGAAGACTCTTGTAATTGAAGACGATGTGCGT
TTTGAGCATCAGTTTAAGAAGAAGCTGATGAAGCTGATGGATAACATTGACCAGGCTCAG
CTGGACTGGGAACTGATTTATATTGGTAGGAAGAGGATGCAAGTAAAGGAGCCAGAGAAA
GCAGTGCCCAATGTGGCAAACCTGGTCGAAGCCGACTATTCCTACTGGACCCTGGGCTAC
GTCATCTCTCTGGAAGGAGCACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGATGCTG
CCAGTGGATGAGTTTCTGCCAGTCATGTACAACAAGCATCCCGTAGCCGAGTACAAGGAG
TATTATGAATCCAGGGACCTGAAAGCCTTCTCTGCAGAACCCTTGCTCATCTACCCTACG
CACTACACAGGCCAGCCGGGGTACCTGAGTGACACGGAGACCTCCACCATCTGGGACAAT
GAGACAGTGGCCACCGACTGGGATAGGACACATGCCTGGAAGTCCCGGAAGCAAAGCCGC
ATCTACAGCAATGCCAAGAACACAGAGGCCCTGCCACCGCCAACCTCCCTGGACACTGTG
CCTTCAAGGGATGAGCTA

ORF Protein

Cloned ORF protein sequence for pFN21AA0584 Download

>KIAA0584  626 aa
MAARPAATLAWSLLLLSSALLREGCRARFVAERDSEDDGEEPVVFPESPLQSPTVLVAVL
ARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRLYHYVEWRP
MDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNL
LIAENKTIVAPMLESRGLYSNFWCGITPKGFYKRTPDYVQIREWKRTGCFPVPMVHSTFL
IDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNREHYGYLPIPLKPHQ
TLQEDIENLIHVQIEAMIDRPPMEPSQYVSVVPKYPDKMGFDEIFMINLKRRKDRRDRML
RTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSV
WKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDNIDQAQLDWELIYIGRKRMQVKEPEK
AVPNVANLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPVMYNKHPVAEYKE
YYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHAWKSRKQSR
IYSNAKNTEALPPPTSLDTVPSRDEL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AA0584 Download

>pFN21AA0584  6583 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTGCGCGCCCTGCTGCCACCCTCGCCTGGTC
GCTACTGCTCCTCTCCTCAGCCCTGCTCCGCGAAGGCTGCCGAGCGCGCTTCGTCGCCGA
GCGGGACTCGGAGGACGACGGAGAGGAGCCGGTGGTTTTCCCGGAGTCGCCCCTGCAGAG
CCCCACGGTGCTCGTGGCGGTCCTCGCCCGCAACGCGGCGCACACGCTGCCGCACTTCCT
CGGCTGCCTGGAGCGGCTGGACTACCCCAAGAGCAGGATGGCCATCTGGGCAGCCACTGA
TCACAATGTGGATAATACAACAGAAATATTCAGGGAGTGGTTGAAAAATGTACAGAGACT
CTATCACTATGTGGAGTGGAGGCCTATGGATGAACCAGAGTCTTACCCTGATGAAATTGG
ACCAAAGCACTGGCCAACCTCCCGGTTTGCCCATGTGATGAAACTACGACAGGCAGCCCT
TCGAACTGCGAGGGAAAAATGGTCAGACTACATTCTGTTCATAGATGTTGACAATTTCCT
GACTAATCCACAGACCCTCAATCTACTGATTGCAGAAAACAAAACTATTGTGGCCCCCAT
GCTGGAGTCTCGGGGCCTGTATTCTAATTTCTGGTGCGGAATCACCCCTAAGGGCTTCTA
TAAGAGGACCCCAGACTACGTTCAGATTCGAGAATGGAAGAGGACAGGCTGCTTCCCCGT
CCCCATGGTCCACTCCACCTTCCTAATTGACCTCAGGAAGGAGGCCTCGGACAAGCTGAC
TTTCTACCCCCCACACCAGGACTACACCTGGACCTTTGATGACATCATTGTCTTTGCCTT
CTCCAGCAGGCAAGCAGGCATCCAGATGTACCTCTGCAACAGAGAGCACTATGGCTACCT
GCCCATCCCCCTGAAGCCCCATCAGACACTGCAGGAAGACATCGAGAACCTCATCCATGT
GCAGATTGAAGCAATGATTGACCGTCCTCCAATGGAACCCTCCCAGTATGTCTCAGTTGT
CCCTAAATATCCAGACAAGATGGGATTTGATGAGATTTTCATGATAAACCTCAAACGCAG
AAAGGACAGGCGGGACCGGATGCTGCGCACACTGTATGAACAGGAGATTGAGGTCAAGAT
TGTCGAGGCTGTGGATGGAAAGGCACTCAACACAAGCCAGCTGAAGGCACTGAATATTGA
AATGCTGCCTGGCTATCGAGATCCCTATTCCTCCAGGCCTCTAACAAGGGGTGAAATCGG
CTGCTTTCTCAGCCACTACTCAGTCTGGAAAGAGGTAATTGATCGAGAGCTAGAGAAGAC
TCTTGTAATTGAAGACGATGTGCGTTTTGAGCATCAGTTTAAGAAGAAGCTGATGAAGCT
GATGGATAACATTGACCAGGCTCAGCTGGACTGGGAACTGATTTATATTGGTAGGAAGAG
GATGCAAGTAAAGGAGCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCCGA
CTATTCCTACTGGACCCTGGGCTACGTCATCTCTCTGGAAGGAGCACAGAAGCTGGTTGG
AGCCAATCCTTTTGGGAAGATGCTGCCAGTGGATGAGTTTCTGCCAGTCATGTACAACAA
GCATCCCGTAGCCGAGTACAAGGAGTATTATGAATCCAGGGACCTGAAAGCCTTCTCTGC
AGAACCCTTGCTCATCTACCCTACGCACTACACAGGCCAGCCGGGGTACCTGAGTGACAC
GGAGACCTCCACCATCTGGGACAATGAGACAGTGGCCACCGACTGGGATAGGACACATGC
CTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCAAGAACACAGAGGCCCTGCC
ACCGCCAACCTCCCTGGACACTGTGCCTTCAAGGGATGAGCTAGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT