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SpecieshumanProduct IDFXC01338Cloning SiteSgfI-PmeIGeneKIBB3831SymbolSLC26A1
Alias : CAON, EDM4, SAT-1, SAT1Descriptionsolute carrier family 26 (anion exchanger), member 1, transcript variant 1Original Clone IDfg06223
Length: 2103 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 701 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS33934.1 0 100.0 SLC26A1 CCDS4300.1 1.7e-138 48.4 SLC26A2 CCDS33933.1 9e-82 98.5 SLC26A1 CCDS5746.1 5.2e-81 32.6 SLC26A4 CCDS5748.1 2.4e-73 32.0 SLC26A3
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR011547 195 473 PF00916 Sulphate transporter IPR002645 535 683 PF01740 Sulphate transporter/antisigma-factor antagonist STAS HMMTigr IPR001902 55 683 TIGR00815 Sulphate anion transporter ProfileScan IPR002645 535 687 PS50801 Sulphate transporter/antisigma-factor antagonist STAS
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 34 RLWCSCSCSVLCVRALVQDLLPA 56 SECONDARY 23 2 69 LAGDVMSGLVIGIILVPQAIAYS 91 PRIMARY 23 3 96 LQPIYSLYTSFFANLIYFLMGTS 118 SECONDARY 23 4 120 HVSVGIFSLLCLMVGQVVDRELQ 142 SECONDARY 23 5 181 ATALTLMTGLYQVLMGVLRLGFV 203 PRIMARY 23 6 260 NVCDVVTSTVCLAVLLAAKELSD 282 SECONDARY 23 7 290 VPLPTELLVIVVATLVSHFGQLH 312 SECONDARY 23 8 340 RVALDAVALALVAAAFSISLAEM 362 SECONDARY 23 9 377 LLAVGCCNVLPAFLHCFATSAAL 399 SECONDARY 23 10 407 ATGCRTQLSSVVSATVVLLVLLA 429 PRIMARY 23 11 433 LFHDLQRSVLACVIVVSLRGAL 454 SECONDARY 22 12 478 AATCMLVSTEAGLLAGVILSLLS 500 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_071325 701 167030,610130 100.0 100.0 NP_998778 701 167030,610130 100.0 100.0 NP_000103 739 222600,226900,256050,600972,606718 48.4 95.7 NP_000432 780 274600,600791,605646 32.6 93.7 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB3831 Download>KIBB3831 2103 bp ATGGACGAGTCCCCTGAGCCTCTGCAGCAGGGCAGAGGGCCGGTGCCGGTCCGACGGCAG CGCCCAGCACCCCGGGGTCTGCGTGAGATGCTGAAGGCCAGGCTGTGGTGCAGCTGCTCG TGCAGTGTGCTGTGCGTCCGGGCGCTGGTGCAGGACCTGCTCCCCGCCACGCGCTGGCTG CGTCAGTACCGCCCGCGGGAGTACCTGGCAGGCGACGTCATGTCTGGGCTGGTCATCGGC ATCATCCTGGTGCCGCAGGCCATCGCCTACTCATTGCTGGCCGGGCTGCAGCCCATCTAC AGCCTCTATACGTCCTTCTTCGCCAACCTCATCTACTTCCTCATGGGCACCTCACGGCAT GTCTCCGTGGGCATCTTCAGCCTGCTTTGCCTCATGGTGGGGCAGGTGGTGGACCGGGAG CTCCAGCTGGCCGGCTTTGACCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAGCAGC ACCCTCAACGGCTCGGCTGCCATGCTGGACTGCGGGCGTGACTGCTACGCCATCCGTGTC GCCACCGCCCTCACGCTGATGACCGGGCTTTACCAGGTCCTCATGGGCGTCCTCCGGCTG GGCTTCGTGTCCGCCTACCTCTCACAGCCACTGCTCGATGGCTTTGCCATGGGGGCCTCC GTGACCATCCTGACCTCGCAGCTCAAACACCTGCTGGGCGTGCGGATCCCGCGGCACCAG GGGCCCGGCATGGTGGTCCTCACATGGCTGAGCCTGCTGCGCGGCGCCGGGCAGGCCAAC GTGTGCGACGTGGTCACCAGCACGGTGTGCCTGGCGGTGCTGCTAGCCGCGAAGGAGCTC TCAGACCGCTACCGACACCGCCTGAGGGTGCCGCTGCCCACGGAGCTGCTGGTCATCGTG GTGGCCACACTCGTGTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAGCGTGGCT GGCGACATCCCCACGGGTTTCATGCCCCCTCAGGTCCCAGAGCCCAGGCTGATGCAGCGT GTGGCTTTGGATGCCGTGGCCCTGGCCCTCGTGGCTGCCGCCTTCTCCATCTCGCTGGCG GAGATGTTCGCCCGCAGTCACGGCTACTCTGTGCGTGCCAACCAGGAGCTGCTGGCTGTG GGCTGCTGCAACGTGCTACCCGCCTTCCTCCACTGCTTCGCCACCAGCGCCGCCCTGGCC AAGAGCCTGGTGAAGACAGCCACTGGCTGCCGGACACAGCTGTCCAGCGTGGTCAGCGCC ACCGTGGTGCTGCTGGTGCTGCTGGCGCTGGCACCGCTGTTCCACGACCTACAGCGAAGC GTGCTGGCCTGCGTCATCGTGGTCAGCCTGCGGGGGGCCCTGCGCAAGGTGTGGGACCTC CCGCGGCTGTGGCGGATGAGCCCGGCTGACGCGCTGGTCTGGGCAGGCACCGCGGCCACC TGTATGCTGGTCAGCACAGAGGCCGGGCTGCTGGCTGGCGTCATCCTCTCGCTGCTCAGC CTGGCCGGCCGCACCCAACGCCCACGCACCGCCCTGCTGGCCCGCATCGGGGACACGGCC TTCTACGAGGATGCCACAGAGTTCGAGGGCCTCGTCCCTGAGCCCGGCGTGCGGGTGTTC CGCTTTGGGGGGCCGCTGTACTATGCCAACAAGGACTTCTTCCTGCAGTCACTCTACAGC CTCACGGGGCTGGACGCAGGGTGCATGGCTGCCAGGAGGAAGGAGGGGGGCTCAGAGACG GGGGTCGGTGAGGGAGGCCCTGCCCAGGGCGAGGACCTGGGCCCGGTTAGCACCAGGGCT GCGCTGGTGCCCGCAGCGGCCGGCTTCCACACAGTGGTCATCGACTGCGCCCCGCTGCTG TTCCTAGACGCAGCCGGTGTGAGCACGCTGCAGGACCTGCGCCGAGACTACGGGGCCCTG GGCATCAGCCTGCTGCTAGCCTGCTGCAGCCCGCCTGTGAGAGACATTCTGAGCAGAGGA GGCTTCCTCGGGGAGGGCCCCGGGGACACGGCTGAGGAGGAGCAGCTGTTCCTCAGTGTG CACGATGCCGTGCAGACAGCACGAGCCCGCCACAGGGAGCTGGAGGCCACCGATGCCCAT CTG
Cloned ORF protein sequence for pF1KB3831 Download>KIBB3831 701 aa MDESPEPLQQGRGPVPVRRQRPAPRGLREMLKARLWCSCSCSVLCVRALVQDLLPATRWL RQYRPREYLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRH VSVGIFSLLCLMVGQVVDRELQLAGFDPSQDGLQPGANSSTLNGSAAMLDCGRDCYAIRV ATALTLMTGLYQVLMGVLRLGFVSAYLSQPLLDGFAMGASVTILTSQLKHLLGVRIPRHQ GPGMVVLTWLSLLRGAGQANVCDVVTSTVCLAVLLAAKELSDRYRHRLRVPLPTELLVIV VATLVSHFGQLHKRFGSSVAGDIPTGFMPPQVPEPRLMQRVALDAVALALVAAAFSISLA EMFARSHGYSVRANQELLAVGCCNVLPAFLHCFATSAALAKSLVKTATGCRTQLSSVVSA TVVLLVLLALAPLFHDLQRSVLACVIVVSLRGALRKVWDLPRLWRMSPADALVWAGTAAT CMLVSTEAGLLAGVILSLLSLAGRTQRPRTALLARIGDTAFYEDATEFEGLVPEPGVRVF RFGGPLYYANKDFFLQSLYSLTGLDAGCMAARRKEGGSETGVGEGGPAQGEDLGPVSTRA ALVPAAAGFHTVVIDCAPLLFLDAAGVSTLQDLRRDYGALGISLLLACCSPPVRDILSRG GFLGEGPGDTAEEEQLFLSVHDAVQTARARHRELEATDAHL
Nucleotide Sequence (with vector) for pF1KB3831 Download>pF1KB3831 5216 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGACGAGTCC CCTGAGCCTCTGCAGCAGGGCAGAGGGCCGGTGCCGGTCCGACGGCAGCGCCCAGCACCC CGGGGTCTGCGTGAGATGCTGAAGGCCAGGCTGTGGTGCAGCTGCTCGTGCAGTGTGCTG TGCGTCCGGGCGCTGGTGCAGGACCTGCTCCCCGCCACGCGCTGGCTGCGTCAGTACCGC CCGCGGGAGTACCTGGCAGGCGACGTCATGTCTGGGCTGGTCATCGGCATCATCCTGGTG CCGCAGGCCATCGCCTACTCATTGCTGGCCGGGCTGCAGCCCATCTACAGCCTCTATACG TCCTTCTTCGCCAACCTCATCTACTTCCTCATGGGCACCTCACGGCATGTCTCCGTGGGC ATCTTCAGCCTGCTTTGCCTCATGGTGGGGCAGGTGGTGGACCGGGAGCTCCAGCTGGCC GGCTTTGACCCCTCCCAGGACGGCCTGCAGCCCGGAGCCAACAGCAGCACCCTCAACGGC TCGGCTGCCATGCTGGACTGCGGGCGTGACTGCTACGCCATCCGTGTCGCCACCGCCCTC ACGCTGATGACCGGGCTTTACCAGGTCCTCATGGGCGTCCTCCGGCTGGGCTTCGTGTCC GCCTACCTCTCACAGCCACTGCTCGATGGCTTTGCCATGGGGGCCTCCGTGACCATCCTG ACCTCGCAGCTCAAACACCTGCTGGGCGTGCGGATCCCGCGGCACCAGGGGCCCGGCATG GTGGTCCTCACATGGCTGAGCCTGCTGCGCGGCGCCGGGCAGGCCAACGTGTGCGACGTG GTCACCAGCACGGTGTGCCTGGCGGTGCTGCTAGCCGCGAAGGAGCTCTCAGACCGCTAC CGACACCGCCTGAGGGTGCCGCTGCCCACGGAGCTGCTGGTCATCGTGGTGGCCACACTC GTGTCGCACTTCGGGCAGCTCCACAAGCGCTTTGGCTCGAGCGTGGCTGGCGACATCCCC ACGGGTTTCATGCCCCCTCAGGTCCCAGAGCCCAGGCTGATGCAGCGTGTGGCTTTGGAT GCCGTGGCCCTGGCCCTCGTGGCTGCCGCCTTCTCCATCTCGCTGGCGGAGATGTTCGCC CGCAGTCACGGCTACTCTGTGCGTGCCAACCAGGAGCTGCTGGCTGTGGGCTGCTGCAAC GTGCTACCCGCCTTCCTCCACTGCTTCGCCACCAGCGCCGCCCTGGCCAAGAGCCTGGTG AAGACAGCCACTGGCTGCCGGACACAGCTGTCCAGCGTGGTCAGCGCCACCGTGGTGCTG CTGGTGCTGCTGGCGCTGGCACCGCTGTTCCACGACCTACAGCGAAGCGTGCTGGCCTGC GTCATCGTGGTCAGCCTGCGGGGGGCCCTGCGCAAGGTGTGGGACCTCCCGCGGCTGTGG CGGATGAGCCCGGCTGACGCGCTGGTCTGGGCAGGCACCGCGGCCACCTGTATGCTGGTC AGCACAGAGGCCGGGCTGCTGGCTGGCGTCATCCTCTCGCTGCTCAGCCTGGCCGGCCGC ACCCAACGCCCACGCACCGCCCTGCTGGCCCGCATCGGGGACACGGCCTTCTACGAGGAT GCCACAGAGTTCGAGGGCCTCGTCCCTGAGCCCGGCGTGCGGGTGTTCCGCTTTGGGGGG CCGCTGTACTATGCCAACAAGGACTTCTTCCTGCAGTCACTCTACAGCCTCACGGGGCTG GACGCAGGGTGCATGGCTGCCAGGAGGAAGGAGGGGGGCTCAGAGACGGGGGTCGGTGAG GGAGGCCCTGCCCAGGGCGAGGACCTGGGCCCGGTTAGCACCAGGGCTGCGCTGGTGCCC GCAGCGGCCGGCTTCCACACAGTGGTCATCGACTGCGCCCCGCTGCTGTTCCTAGACGCA GCCGGTGTGAGCACGCTGCAGGACCTGCGCCGAGACTACGGGGCCCTGGGCATCAGCCTG CTGCTAGCCTGCTGCAGCCCGCCTGTGAGAGACATTCTGAGCAGAGGAGGCTTCCTCGGG GAGGGCCCCGGGGACACGGCTGAGGAGGAGCAGCTGTTCCTCAGTGTGCACGATGCCGTG CAGACAGCACGAGCCCGCCACAGGGAGCTGGAGGCCACCGATGCCCATCTGGTTTAAACG AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC CCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAAT CCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATC TTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCT ACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGG CTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCA CTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGC TGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGA TAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAAC GACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGA AGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAG GGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTG ACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAG CAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCC TGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGG AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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