LRR1 ORF clone FXC02421

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Flexi ORF Clone FXC02421

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Clone info.

Species

human

Clone Name

pF1KB7393 Sequence (with vector) Restriction Map

Product ID

FXC02421

HaloTag Clone PID

FHC02421

ORF Sequence

DNA sequence (1242 bp)
Protein sequence (414 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464006]

Gene

KIBB7393

Symbol

LRR1

Alias : 4-1BBLRR, LRR-1, PPIL5

Description

leucine rich repeat protein 1, transcript variant 1

Original Clone ID

oc00607

Features of the cloned ORF sequence

Description

Length: 1242 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 414 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9686.1 2e-141 100.0 LRR1 CCDS9687.1 3.2e-28 87.6 LRR1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001611 178 197 PF00560 Leucine-rich repeat IPR001611 201 219 PF00560 Leucine-rich repeat IPR001611 227 248 PF00560 Leucine-rich repeat HMMSmart IPR003591 176 198 SM00369 Leucine-rich repeat IPR003591 199 222 SM00369 Leucine-rich repeat IPR003591 226 248 SM00369 Leucine-rich repeat IPR003591 271 293 SM00369 Leucine-rich repeat ProfileScan IPR001611 178 199 PS51450 Leucine-rich repeat IPR001611 201 222 PS51450 Leucine-rich repeat IPR001611 227 248 PS51450 Leucine-rich repeat IPR001611 250 271 PS51450 Leucine-rich repeat IPR001611 273 294 PS51450 Leucine-rich repeat IPR001611 295 316 PS51450 Leucine-rich repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_689542 414 609193 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7393 Download

>KIBB7393  1242 bp
ATGAAGCTACACTGTGAGGTGGAGGTGATCAGCCGGCACTTGCCCGCCTTGGGGCTTAGG
AACCGGGGCAAGGGCGTCCGAGCCGTGTTGAGCCTCTGTCAGCAGACTTCCAGGAGTCAG
CCGCCGGTCCGAGCCTTCCTGCTCATCTCCACCCTGAAGGACAAGCGCGGGACCCGCTAT
GAGCTAAGGGAGAACATTGAGCAATTCTTCACCAAATTTGTAGATGAGGGGAAAGCCACT
GTTCGGTTAAAGGAGCCTCCTGTGGATATCTGTCTAAGTAAGGCCATTTCCAGCAGTTTA
AAAGGTTTCCTTTCAGCTATGAGACTGGCTCATAGAGGCTGTAATGTTGATACACCAGTT
TCAACGCTCACACCAGTGAAGACTTCAGAATTTGAAAACTTTAAAACTAAAATGGTTATC
ACATCCAAAAAAGACTATCCTCTAAGTAAGAATTTTCCATATTCCTTGGAACATCTTCAG
ACTTCTTACTGTGGGCTTGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAAGCCTTAGG
AAATTAGACTTGAGTCACAACCATATAAAAAAGCTTCCAGCTACAATTGGAGACCTCATA
CACCTTCAAGAACTTAACCTGAATGACAATCACTTGGAGTCATTTAGTGTAGCCTTGTGT
CATTCTACACTCCAGAAGTCACTTCGGAGTTTGGACCTCAGCAAGAACAAAATCAAGGCA
CTCCCTGTGCAGTTTTGCCAGCTCCAGGAACTTAAGAATTTAAAACTTGACGATAATGAA
TTGATTCAATTTCCTTGCAAGATAGGACAACTAATAAACCTTCGCTTTTTGTCAGCAGCT
CGAAATAAGCTTCCATTTTTGCCTAGTGAATTTAGAAATTTATCCCTTGAATACTTGGAT
CTTTTTGGAAATACTTTTGAACAACCAAAAGTCCTTCCAGTAATAAAGCTGCAAGCACCA
TTAACTTTATTGGAATCTTCTGCACGAACCATATTACATAATAGGATTCCATATGGCTCT
CATATCATTCCATTCCATCTCTGCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTGGA
AGATTCTGTCTGAACTCTTTCATTCAAGGAACTACTACCATGAATCTGCATTCTGTTGCC
CACACTGTGGTCTTAGTAGATAATTTGGGTGGTACTGAAGCACCTATTATCTCTTATTTC
TGTTCTCTAGGCTGTTATGTTAATTCCTCTGATATGTTAAAG

ORF Protein

Cloned ORF protein sequence for pF1KB7393 Download

>KIBB7393  414 aa
MKLHCEVEVISRHLPALGLRNRGKGVRAVLSLCQQTSRSQPPVRAFLLISTLKDKRGTRY
ELRENIEQFFTKFVDEGKATVRLKEPPVDICLSKAISSSLKGFLSAMRLAHRGCNVDTPV
STLTPVKTSEFENFKTKMVITSKKDYPLSKNFPYSLEHLQTSYCGLVRVDMRMLCLKSLR
KLDLSHNHIKKLPATIGDLIHLQELNLNDNHLESFSVALCHSTLQKSLRSLDLSKNKIKA
LPVQFCQLQELKNLKLDDNELIQFPCKIGQLINLRFLSAARNKLPFLPSEFRNLSLEYLD
LFGNTFEQPKVLPVIKLQAPLTLLESSARTILHNRIPYGSHIIPFHLCQDLDTAKICVCG
RFCLNSFIQGTTTMNLHSVAHTVVLVDNLGGTEAPIISYFCSLGCYVNSSDMLK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7393 Download

>pF1KB7393  4355 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAAGCTACAC
TGTGAGGTGGAGGTGATCAGCCGGCACTTGCCCGCCTTGGGGCTTAGGAACCGGGGCAAG
GGCGTCCGAGCCGTGTTGAGCCTCTGTCAGCAGACTTCCAGGAGTCAGCCGCCGGTCCGA
GCCTTCCTGCTCATCTCCACCCTGAAGGACAAGCGCGGGACCCGCTATGAGCTAAGGGAG
AACATTGAGCAATTCTTCACCAAATTTGTAGATGAGGGGAAAGCCACTGTTCGGTTAAAG
GAGCCTCCTGTGGATATCTGTCTAAGTAAGGCCATTTCCAGCAGTTTAAAAGGTTTCCTT
TCAGCTATGAGACTGGCTCATAGAGGCTGTAATGTTGATACACCAGTTTCAACGCTCACA
CCAGTGAAGACTTCAGAATTTGAAAACTTTAAAACTAAAATGGTTATCACATCCAAAAAA
GACTATCCTCTAAGTAAGAATTTTCCATATTCCTTGGAACATCTTCAGACTTCTTACTGT
GGGCTTGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAAGCCTTAGGAAATTAGACTTG
AGTCACAACCATATAAAAAAGCTTCCAGCTACAATTGGAGACCTCATACACCTTCAAGAA
CTTAACCTGAATGACAATCACTTGGAGTCATTTAGTGTAGCCTTGTGTCATTCTACACTC
CAGAAGTCACTTCGGAGTTTGGACCTCAGCAAGAACAAAATCAAGGCACTCCCTGTGCAG
TTTTGCCAGCTCCAGGAACTTAAGAATTTAAAACTTGACGATAATGAATTGATTCAATTT
CCTTGCAAGATAGGACAACTAATAAACCTTCGCTTTTTGTCAGCAGCTCGAAATAAGCTT
CCATTTTTGCCTAGTGAATTTAGAAATTTATCCCTTGAATACTTGGATCTTTTTGGAAAT
ACTTTTGAACAACCAAAAGTCCTTCCAGTAATAAAGCTGCAAGCACCATTAACTTTATTG
GAATCTTCTGCACGAACCATATTACATAATAGGATTCCATATGGCTCTCATATCATTCCA
TTCCATCTCTGCCAAGATTTGGATACCGCAAAAATTTGTGTTTGTGGAAGATTCTGTCTG
AACTCTTTCATTCAAGGAACTACTACCATGAATCTGCATTCTGTTGCCCACACTGTGGTC
TTAGTAGATAATTTGGGTGGTACTGAAGCACCTATTATCTCTTATTTCTGTTCTCTAGGC
TGTTATGTTAATTCCTCTGATATGTTAAAGGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT