SPOCK1 ORF clone FXC02372

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Flexi ORF Clone FXC02372

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Clone info.

Species

human

Clone Name

pF1KB7272 Sequence (with vector) Restriction Map

Product ID

FXC02372

HaloTag Clone PID

FHC02372

ORF Sequence

DNA sequence (1326 bp)
Protein sequence (442 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463280]

Gene

KIBB7272

Symbol

SPOCK1

Alias : SPOCK, TESTICAN, TIC1

Description

sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1

Original Clone ID

bh00186m1

Features of the cloned ORF sequence

Description

Length: 1326 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 442 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4191.1 1.3e-164 99.3 SPOCK1 CCDS54817.1 2.9e-85 54.4 SPOCK3 CCDS34095.1 1.8e-83 53.7 SPOCK3 CCDS56344.1 5.2e-74 54.4 SPOCK3 CCDS7313.1 2.1e-67 47.3 SPOCK2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR011497 142 183 PF07648 Protease inhibitor IPR019577 199 307 PF10591 SPARC/Testican IPR000716 316 379 PF00086 Thyroglobulin type-1 HMMSmart IPR002350 138 183 SM00280 Proteinase inhibitor I1 IPR000716 337 383 SM00211 Thyroglobulin type-1 ProfileScan NULL 133 184 PS51465 NULL IPR000716 313 379 PS51162 Thyroglobulin type-1
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MPAIAVLAAAAAAWCFLQVESRH 23 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004589 439 602264 99.3 100.0 XP_011530320 436 607989 54.4 97.5 NP_058646 436 607989 54.4 97.5 XP_016863747 433 607989 53.7 97.5 NP_001035249 433 607989 53.7 97.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7272 Download

>KIBB7272  1326 bp
ATGCCGGCTATCGCGGTGTTGGCGGCGGCCGCCGCGGCGTGGTGCTTCCTCCAAGTCGAG
AGCCGGCACCTGGACGCGCTCGCCGGAGGCGCGGGCCCCAACCACGGCAATTTCCTAGAC
AATGACCAGTGGCTGAGCACCGTCTCCCAGTACGACCGGGACAAGTACTGGAACCGCTTT
CGAGACGAAGTTGAGGATGATTATTTCAGAAACTGGAATCCCAACAAGCCCTTTGACCAA
GCCCTGGACCCATCCAAGGACCCCTGCCTGAAGGTAAAATGCAGCCCTCACAAAGTGTGT
GTGACCCAGGACTACCAGACCGCCCTGTGTGTCAGCCGCAAGCACCTGCTCCCCAGGCAA
AAGAAGGGGAACGTGGCCCAGAAACACTGGGTTGGACCTTCGAATTTGGTCAAGTGCAAG
CCCTGTCCCGTGGCACAGTCAGCCATGGTCTGCGGCTCAGATGGCCACTCCTACACATCC
AAGTGCAAATTGGAGTTCCATGCTTGTTCTACTGGCAAAAGCCTCGCCACCCTCTGTGAT
GGGCCCTGTCCCTGTCTCCCAGAGCCTGAGCCACCAAAGCACAAGGCAGAAAGGAGTGCC
TGCACAGACAAGGAGTTGCGGAACCTTGCCTCCCGGCTGAAGGATTGGTTTGGAGCTCTC
CACGAGGATGCGAACAGAGTCATCAAGCCCACCAGCTCCAACACAGCCCAAGGCAGGTTT
GACACTAGCATCCTGCCCATCTGCAAGGACTCCCTGGGCTGGATGTTCAACAAGTTGGAC
ATGAACTATGACCTCCTGCTTGACCCTTCAGAGATCAATGCCATCTACCTGGATAAGTAC
GAGCCCTGTATCAAGCCTCTTTTCAACTCGTGTGACTCCTTCAAGGATGGCAAGCTTTCT
AACAATGAGTGGTGCTACTGCTTCCAGAAGCCTGGAGGTCTCCCTTGCCAGAATGAAATG
AACAGAATTCAGAAGCTGAGTAAGGGGAAAAGCCTGTTGGGGGCCTTCATACCTCGGTGT
AATGAGGAGGGCTATTACAAAGCCACACAGTGCCACGGCAGCACGGGGCAGTGCTGGTGT
GTGGACAAATATGGGAATGAGTTGGCTGGCTCCAGGAAACAGGGTGCTGTGAGCTGTGAA
GAGGAGCAGGAAACCTCAGGGGATTTTGGCAGTGGTGGGTCCGTGGTCCTGCTGGATGAC
CTAGAATATGAACGGGAGCTGGGACCAAAGGACAAAGAGGGGAAGCTGAGGGTGCACACC
CGAGCCGTGACAGAGGATGATGAGGATGAGGATGATGACAAAGAGGATGAGGTCGGGTAC
ATATGG

ORF Protein

Cloned ORF protein sequence for pF1KB7272 Download

>KIBB7272  442 aa
MPAIAVLAAAAAAWCFLQVESRHLDALAGGAGPNHGNFLDNDQWLSTVSQYDRDKYWNRF
RDEVEDDYFRNWNPNKPFDQALDPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQ
KKGNVAQKHWVGPSNLVKCKPCPVAQSAMVCGSDGHSYTSKCKLEFHACSTGKSLATLCD
GPCPCLPEPEPPKHKAERSACTDKELRNLASRLKDWFGALHEDANRVIKPTSSNTAQGRF
DTSILPICKDSLGWMFNKLDMNYDLLLDPSEINAIYLDKYEPCIKPLFNSCDSFKDGKLS
NNEWCYCFQKPGGLPCQNEMNRIQKLSKGKSLLGAFIPRCNEEGYYKATQCHGSTGQCWC
VDKYGNELAGSRKQGAVSCEEEQETSGDFGSGGSVVLLDDLEYERELGPKDKEGKLRVHT
RAVTEDDEDEDDDKEDEVGYIW

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7272 Download

>pF1KB7272  4439 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCGGCTATC
GCGGTGTTGGCGGCGGCCGCCGCGGCGTGGTGCTTCCTCCAAGTCGAGAGCCGGCACCTG
GACGCGCTCGCCGGAGGCGCGGGCCCCAACCACGGCAATTTCCTAGACAATGACCAGTGG
CTGAGCACCGTCTCCCAGTACGACCGGGACAAGTACTGGAACCGCTTTCGAGACGAAGTT
GAGGATGATTATTTCAGAAACTGGAATCCCAACAAGCCCTTTGACCAAGCCCTGGACCCA
TCCAAGGACCCCTGCCTGAAGGTAAAATGCAGCCCTCACAAAGTGTGTGTGACCCAGGAC
TACCAGACCGCCCTGTGTGTCAGCCGCAAGCACCTGCTCCCCAGGCAAAAGAAGGGGAAC
GTGGCCCAGAAACACTGGGTTGGACCTTCGAATTTGGTCAAGTGCAAGCCCTGTCCCGTG
GCACAGTCAGCCATGGTCTGCGGCTCAGATGGCCACTCCTACACATCCAAGTGCAAATTG
GAGTTCCATGCTTGTTCTACTGGCAAAAGCCTCGCCACCCTCTGTGATGGGCCCTGTCCC
TGTCTCCCAGAGCCTGAGCCACCAAAGCACAAGGCAGAAAGGAGTGCCTGCACAGACAAG
GAGTTGCGGAACCTTGCCTCCCGGCTGAAGGATTGGTTTGGAGCTCTCCACGAGGATGCG
AACAGAGTCATCAAGCCCACCAGCTCCAACACAGCCCAAGGCAGGTTTGACACTAGCATC
CTGCCCATCTGCAAGGACTCCCTGGGCTGGATGTTCAACAAGTTGGACATGAACTATGAC
CTCCTGCTTGACCCTTCAGAGATCAATGCCATCTACCTGGATAAGTACGAGCCCTGTATC
AAGCCTCTTTTCAACTCGTGTGACTCCTTCAAGGATGGCAAGCTTTCTAACAATGAGTGG
TGCTACTGCTTCCAGAAGCCTGGAGGTCTCCCTTGCCAGAATGAAATGAACAGAATTCAG
AAGCTGAGTAAGGGGAAAAGCCTGTTGGGGGCCTTCATACCTCGGTGTAATGAGGAGGGC
TATTACAAAGCCACACAGTGCCACGGCAGCACGGGGCAGTGCTGGTGTGTGGACAAATAT
GGGAATGAGTTGGCTGGCTCCAGGAAACAGGGTGCTGTGAGCTGTGAAGAGGAGCAGGAA
ACCTCAGGGGATTTTGGCAGTGGTGGGTCCGTGGTCCTGCTGGATGACCTAGAATATGAA
CGGGAGCTGGGACCAAAGGACAAAGAGGGGAAGCTGAGGGTGCACACCCGAGCCGTGACA
GAGGATGATGAGGATGAGGATGATGACAAAGAGGATGAGGTCGGGTACATATGGGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAA
AATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGG
ATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACC
GCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAAC
TGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCA
CCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGT
GGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACC
GGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCG
AACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCC
CGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCAC
GAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCT
CTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGC
CAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTT
TCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATAC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT