DPF2 ORF clone FXC02197

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC02197

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Clone info.

Species

human

Clone Name

pF1KB5477 Sequence (with vector) Restriction Map

Product ID

FXC02197

HaloTag Clone PID

FHC02197

Original Clone PID

ORK02197

ORF Sequence

DNA sequence (1173 bp)
Protein sequence (391 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463002]

Gene

KIBB5477

Symbol

DPF2

Alias : CSS7, REQ, SMARCG2, UBID4, ubi-d4

Description

D4, zinc and double PHD fingers family 2

Original Clone ID

bm05765

Features of the cloned ORF sequence

Description

Length: 1173 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 391 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8100.1 1.4e-86 100.0 DPF2 CCDS81583.1 5.3e-43 96.3 DPF2 CCDS46064.1 9.3e-37 59.7 DPF1 CCDS61497.1 2.4e-34 63.0 DPF3 CCDS46065.1 8.3e-28 58.4 DPF1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019787 272 330 PF00628 Zinc finger IPR019787 330 374 PF00628 Zinc finger HMMSmart IPR015880 209 232 SM00355 Zinc finger IPR001965 272 328 SM00249 Zinc finger IPR001965 329 375 SM00249 Zinc finger ProfileScan IPR007087 209 237 PS50157 Zinc finger IPR019787 270 330 PS50016 Zinc finger IPR019787 327 377 PS50016 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006259 391 601671 100.0 100.0 XP_016873591 371 601671 100.0 94.9 NP_001317237 405 601671 96.3 100.0 XP_016873590 385 601671 96.1 94.9 XP_005259347 388 601670 60.0 98.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5477 Download

>KIBB5477  1173 bp
ATGGCGGCTGTGGTGGAGAATGTAGTGAAGCTCCTTGGGGAGCAGTACTACAAAGATGCC
ATGGAGCAGTGCCACAATTACAATGCTCGCCTCTGTGCTGAGCGCAGCGTGCGCCTGCCT
TTCTTGGACTCACAGACCGGAGTAGCCCAGAGCAATTGTTACATCTGGATGGAAAAGCGA
CACCGGGGTCCAGGATTGGCCTCCGGACAGCTGTACTCCTACCCTGCCCGGCGCTGGCGG
AAAAAGCGGCGAGCCCATCCCCCTGAGGATCCACGACTTTCCTTCCCATCTATTAAGCCA
GACACAGACCAGACCCTGAAGAAGGAGGGGCTGATCTCTCAGGATGGCAGTAGTTTAGAG
GCTCTGTTGCGCACTGACCCCCTGGAGAAGCGAGGTGCCCCGGATCCCCGAGTTGATGAT
GACAGCCTGGGCGAGTTTCCTGTGACCAACAGTCGAGCGCGAAAGCGGATCCTAGAACCA
GATGACTTCCTGGATGACCTCGATGATGAAGACTATGAAGAAGATACTCCCAAGCGTCGG
GGAAAGGGGAAATCCAAGGGTAAGGGTGTGGGCAGTGCCCGTAAGAAGCTGGATGCTTCC
ATCCTGGAGGACCGGGATAAGCCCTATGCCTGTGACATTTGTGGAAAACGTTACAAGAAC
CGACCAGGCCTCAGTTACCACTATGCCCACTCCCACTTGGCTGAGGAGGAGGGCGAGGAC
AAGGAAGACTCTCAACCACCCACTCCTGTTTCCCAGAGGTCTGAGGAGCAGAAATCCAAA
AAGGGTCCTGATGGATTGGCCTTGCCCAACAACTACTGTGACTTCTGCCTGGGGGACTCA
AAGATTAACAAGAAGACGGGACAACCCGAGGAGCTGGTGTCCTGTTCTGACTGTGGCCGC
TCAGGGCATCCATCTTGCCTCCAATTTACCCCCGTGATGATGGCGGCAGTGAAGACATAC
CGCTGGCAGTGCATCGAGTGCAAATGTTGCAATATCTGCGGCACCTCCGAGAATGACGAC
CAGTTGCTCTTCTGTGATGACTGCGATCGTGGCTACCACATGTACTGTCTCACCCCGTCC
ATGTCTGAGCCCCCTGAAGGAAGTTGGAGCTGCCACCTGTGTCTGGACCTGTTGAAAGAG
AAAGCTTCCATCTACCAGAACCAGAACTCCTCT

ORF Protein

Cloned ORF protein sequence for pF1KB5477 Download

>KIBB5477  391 aa
MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR
SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPS
MSEPPEGSWSCHLCLDLLKEKASIYQNQNSS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5477 Download

>pF1KB5477  4286 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGCTGTG
GTGGAGAATGTAGTGAAGCTCCTTGGGGAGCAGTACTACAAAGATGCCATGGAGCAGTGC
CACAATTACAATGCTCGCCTCTGTGCTGAGCGCAGCGTGCGCCTGCCTTTCTTGGACTCA
CAGACCGGAGTAGCCCAGAGCAATTGTTACATCTGGATGGAAAAGCGACACCGGGGTCCA
GGATTGGCCTCCGGACAGCTGTACTCCTACCCTGCCCGGCGCTGGCGGAAAAAGCGGCGA
GCCCATCCCCCTGAGGATCCACGACTTTCCTTCCCATCTATTAAGCCAGACACAGACCAG
ACCCTGAAGAAGGAGGGGCTGATCTCTCAGGATGGCAGTAGTTTAGAGGCTCTGTTGCGC
ACTGACCCCCTGGAGAAGCGAGGTGCCCCGGATCCCCGAGTTGATGATGACAGCCTGGGC
GAGTTTCCTGTGACCAACAGTCGAGCGCGAAAGCGGATCCTAGAACCAGATGACTTCCTG
GATGACCTCGATGATGAAGACTATGAAGAAGATACTCCCAAGCGTCGGGGAAAGGGGAAA
TCCAAGGGTAAGGGTGTGGGCAGTGCCCGTAAGAAGCTGGATGCTTCCATCCTGGAGGAC
CGGGATAAGCCCTATGCCTGTGACATTTGTGGAAAACGTTACAAGAACCGACCAGGCCTC
AGTTACCACTATGCCCACTCCCACTTGGCTGAGGAGGAGGGCGAGGACAAGGAAGACTCT
CAACCACCCACTCCTGTTTCCCAGAGGTCTGAGGAGCAGAAATCCAAAAAGGGTCCTGAT
GGATTGGCCTTGCCCAACAACTACTGTGACTTCTGCCTGGGGGACTCAAAGATTAACAAG
AAGACGGGACAACCCGAGGAGCTGGTGTCCTGTTCTGACTGTGGCCGCTCAGGGCATCCA
TCTTGCCTCCAATTTACCCCCGTGATGATGGCGGCAGTGAAGACATACCGCTGGCAGTGC
ATCGAGTGCAAATGTTGCAATATCTGCGGCACCTCCGAGAATGACGACCAGTTGCTCTTC
TGTGATGACTGCGATCGTGGCTACCACATGTACTGTCTCACCCCGTCCATGTCTGAGCCC
CCTGAAGGAAGTTGGAGCTGCCACCTGTGTCTGGACCTGTTGAAAGAGAAAGCTTCCATC
TACCAGAACCAGAACTCCTCTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAA
GATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGC
GTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAAT
CTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGA
GCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGT
CCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATA
CCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTAC
CGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGG
TTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCG
TGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAG
CGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCT
TTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTC
AGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTT
TTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCG
TATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT