Result of FASTA (omim) for pF1KB5477
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5477, 391 aa
  1>>>pF1KB5477 391 - 391 aa - 391 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.2056+/-0.000368; mu= 5.6816+/- 0.023
 mean_var=330.7506+/-79.312, 0's: 0 Z-trim(121.6): 147  B-trim: 2126 in 1/54
 Lambda= 0.070522
 statistics sampled from 38152 (38403) to 38152 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.78), E-opt: 0.2 (0.45), width:  16
 Scan time:  9.380

The best scores are:                                      opt bits E(85289)
NP_006259 (OMIM: 601671) zinc finger protein ubi-d ( 391) 2773 295.8 1.2e-79
XP_016873591 (OMIM: 601671) PREDICTED: zinc finger ( 371) 2651 283.3 6.3e-76
NP_001317237 (OMIM: 601671) zinc finger protein ub ( 405) 1454 161.6 3.1e-39
XP_016873590 (OMIM: 601671) PREDICTED: zinc finger ( 385) 1332 149.2 1.6e-35
XP_005259347 (OMIM: 601670) PREDICTED: zinc finger ( 388) 1285 144.4 4.5e-34
XP_006723471 (OMIM: 601670) PREDICTED: zinc finger ( 396) 1273 143.2 1.1e-33
NP_001128627 (OMIM: 601670) zinc finger protein ne ( 414) 1265 142.4 1.9e-33
NP_001267471 (OMIM: 601672) zinc finger protein DP ( 378) 1191 134.8 3.3e-31
XP_016877159 (OMIM: 601672) PREDICTED: zinc finger ( 378) 1191 134.8 3.3e-31
XP_005259349 (OMIM: 601670) PREDICTED: zinc finger ( 369) 1156 131.2 3.9e-30
XP_005259346 (OMIM: 601670) PREDICTED: zinc finger ( 397) 1154 131.1 4.7e-30
NP_001128628 (OMIM: 601670) zinc finger protein ne ( 332)  992 114.5 3.8e-25
XP_006723470 (OMIM: 601670) PREDICTED: zinc finger ( 398)  968 112.1 2.3e-24
NP_001276907 (OMIM: 601670) zinc finger protein ne ( 424)  948 110.1 9.9e-24
XP_016877161 (OMIM: 601672) PREDICTED: zinc finger ( 354)  881 103.2   1e-21
XP_011525658 (OMIM: 601670) PREDICTED: zinc finger ( 407)  780 93.0 1.3e-18
XP_016877163 (OMIM: 601672) PREDICTED: zinc finger ( 301)  665 81.1 3.8e-15
XP_016877162 (OMIM: 601672) PREDICTED: zinc finger ( 347)  665 81.2 4.1e-15
NP_036206 (OMIM: 601672) zinc finger protein DPF3  ( 357)  665 81.2 4.1e-15
XP_016877160 (OMIM: 601672) PREDICTED: zinc finger ( 367)  665 81.3 4.2e-15
NP_001267472 (OMIM: 601672) zinc finger protein DP ( 367)  665 81.3 4.2e-15
NP_001267473 (OMIM: 601672) zinc finger protein DP ( 412)  665 81.3 4.5e-15
XP_016877164 (OMIM: 601672) PREDICTED: zinc finger ( 249)  628 77.3 4.6e-14
XP_011525659 (OMIM: 601670) PREDICTED: zinc finger ( 379)  559 70.5 7.6e-12
NP_004638 (OMIM: 601670) zinc finger protein neuro ( 380)  529 67.4 6.3e-11
XP_016871498 (OMIM: 603736,605880,606170) PREDICTE (1727)  508 66.2 6.6e-10
XP_016871495 (OMIM: 603736,605880,606170) PREDICTE (1781)  508 66.3 6.8e-10
XP_016871496 (OMIM: 603736,605880,606170) PREDICTE (1781)  508 66.3 6.8e-10
NP_001243398 (OMIM: 603736,605880,606170) histone  (1781)  508 66.3 6.8e-10
XP_016871497 (OMIM: 603736,605880,606170) PREDICTE (1781)  508 66.3 6.8e-10
XP_016871494 (OMIM: 603736,605880,606170) PREDICTE (1890)  508 66.3   7e-10
NP_001243397 (OMIM: 603736,605880,606170) histone  (1890)  508 66.3   7e-10
XP_016871493 (OMIM: 603736,605880,606170) PREDICTE (2019)  508 66.3 7.3e-10
NP_036462 (OMIM: 603736,605880,606170) histone ace (2073)  508 66.3 7.4e-10
XP_005269721 (OMIM: 603736,605880,606170) PREDICTE (2073)  508 66.3 7.4e-10
XP_016871491 (OMIM: 603736,605880,606170) PREDICTE (2073)  508 66.3 7.4e-10
XP_016871492 (OMIM: 603736,605880,606170) PREDICTE (2073)  508 66.3 7.4e-10
XP_016871490 (OMIM: 603736,605880,606170) PREDICTE (2073)  508 66.3 7.4e-10
XP_016871489 (OMIM: 603736,605880,606170) PREDICTE (2073)  508 66.3 7.4e-10
NP_001292807 (OMIM: 601408,616268) histone acetylt ( 815)  489 63.8 1.6e-09
NP_006757 (OMIM: 601408,616268) histone acetyltran (2004)  489 64.4 2.8e-09
XP_016869353 (OMIM: 601408,616268) PREDICTED: hist (2004)  489 64.4 2.8e-09
XP_016869352 (OMIM: 601408,616268) PREDICTED: hist (2004)  489 64.4 2.8e-09
XP_011542961 (OMIM: 601408,616268) PREDICTED: hist (2041)  489 64.4 2.8e-09
XP_011542959 (OMIM: 601408,616268) PREDICTED: hist (2048)  489 64.4 2.8e-09
XP_011542958 (OMIM: 601408,616268) PREDICTED: hist (2048)  489 64.4 2.8e-09
XP_011542960 (OMIM: 601408,616268) PREDICTED: hist (2048)  489 64.4 2.8e-09
XP_006723472 (OMIM: 601670) PREDICTED: zinc finger ( 242)  467 60.9 3.8e-09
XP_006723473 (OMIM: 601670) PREDICTED: zinc finger ( 242)  467 60.9 3.8e-09
XP_016866487 (OMIM: 613069) PREDICTED: PHD finger  ( 446)  445 59.0 2.6e-08


>>NP_006259 (OMIM: 601671) zinc finger protein ubi-d4 is  (391 aa)
 initn: 2773 init1: 2773 opt: 2773  Z-score: 1550.9  bits: 295.8 E(85289): 1.2e-79
Smith-Waterman score: 2773; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)

               10        20        30        40        50        60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPS
              310       320       330       340       350       360

              370       380       390 
pF1KB5 MSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
       :::::::::::::::::::::::::::::::
NP_006 MSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
              370       380       390 

>>XP_016873591 (OMIM: 601671) PREDICTED: zinc finger pro  (371 aa)
 initn: 2651 init1: 2651 opt: 2651  Z-score: 1484.1  bits: 283.3 E(85289): 6.3e-76
Smith-Waterman score: 2651; 100.0% identity (100.0% similar) in 371 aa overlap (21-391:1-371)

               10        20        30        40        50        60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
                           ::::::::::::::::::::::::::::::::::::::::
XP_016                     MEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
                                   10        20        30        40

               70        80        90       100       110       120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
               50        60        70        80        90       100

              130       140       150       160       170       180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
              110       120       130       140       150       160

              190       200       210       220       230       240
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
              170       180       190       200       210       220

              250       260       270       280       290       300
pF1KB5 KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR
              230       240       250       260       270       280

              310       320       330       340       350       360
pF1KB5 SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPS
              290       300       310       320       330       340

              370       380       390 
pF1KB5 MSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
       :::::::::::::::::::::::::::::::
XP_016 MSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
              350       360       370 

>>NP_001317237 (OMIM: 601671) zinc finger protein ubi-d4  (405 aa)
 initn: 2758 init1: 1454 opt: 1454  Z-score: 825.5  bits: 161.6 E(85289): 3.1e-39
Smith-Waterman score: 2734; 96.3% identity (96.5% similar) in 405 aa overlap (1-391:1-405)

               10        20        30        40        50        60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
              130       140       150       160       170       180

              190       200       210                     220      
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACD--------------ICGKRYKNRPGLSY
       ::::::::::::::::::::::::::::::::              .:::::::::::::
NP_001 GKGKSKGKGVGSARKKLDASILEDRDKPYACDNSFKQKHTSKAPQRVCGKRYKNRPGLSY
              190       200       210       220       230       240

        230       240       250       260       270       280      
pF1KB5 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKT
              250       260       270       280       290       300

        290       300       310       320       330       340      
pF1KB5 GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
              310       320       330       340       350       360

        350       360       370       380       390 
pF1KB5 DCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
       :::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
              370       380       390       400     

>>XP_016873590 (OMIM: 601671) PREDICTED: zinc finger pro  (385 aa)
 initn: 2636 init1: 1332 opt: 1332  Z-score: 758.6  bits: 149.2 E(85289): 1.6e-35
Smith-Waterman score: 2612; 96.1% identity (96.4% similar) in 385 aa overlap (21-391:1-385)

               10        20        30        40        50        60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
                           ::::::::::::::::::::::::::::::::::::::::
XP_016                     MEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
                                   10        20        30        40

               70        80        90       100       110       120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
               50        60        70        80        90       100

              130       140       150       160       170       180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
              110       120       130       140       150       160

              190       200       210                     220      
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACD--------------ICGKRYKNRPGLSY
       ::::::::::::::::::::::::::::::::              .:::::::::::::
XP_016 GKGKSKGKGVGSARKKLDASILEDRDKPYACDNSFKQKHTSKAPQRVCGKRYKNRPGLSY
              170       180       190       200       210       220

        230       240       250       260       270       280      
pF1KB5 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKT
              230       240       250       260       270       280

        290       300       310       320       330       340      
pF1KB5 GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
              290       300       310       320       330       340

        350       360       370       380       390 
pF1KB5 DCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
       :::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
              350       360       370       380     

>>XP_005259347 (OMIM: 601670) PREDICTED: zinc finger pro  (388 aa)
 initn: 1730 init1: 664 opt: 1285  Z-score: 732.8  bits: 144.4 E(85289): 4.5e-34
Smith-Waterman score: 1635; 60.0% identity (77.4% similar) in 402 aa overlap (1-385:1-384)

               10        20        30        40        50        60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
       ::....: .: :::..:..:.:.:..::::::::::.:::::::::::::.:::::::: 
XP_005 MATAIQNPLKSLGEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
       ::::::: ::.:.:::: :::::: .  :::::     : : .  ::::: . . :  ::
XP_005 HRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPE-GPVLE
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
       ::: ..  ::.      ..   : :  .  .  ....::   :  ::. :: :.: :.:.
XP_005 ALLCAETGEKK------IE---LKEEETIMDCQKQQLLE---FPHDLEVEDLEDDIPRRK
     120       130                140          150       160       

              190       200       210       220       230       240
pF1KB5 GKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGED
       ...:.:. :.:. ::. :.. ::::::::.::::::::::::::::::.:.::::::::.
XP_005 NRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEEGEE
       170       180       190       200       210       220       

                               250       260       270       280   
pF1KB5 KEDSQP-P----------------TPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKIN
       . . .  :                .: .::  .. .::.::: ..::.::::::: ::  
XP_005 NAERHALPFHRKNNHKQFYKELAWVPEAQR--KHTAKKAPDGTVIPNGYCDFCLGGSK--
       230       240       250         260       270       280     

           290       300       310       320       330       340   
pF1KB5 KKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLL
        ::: ::.:.::.::::::::::::::  : :::.:::::::::: :..:::::::::::
XP_005 -KTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLL
            290       300       310       320       330       340  

           350       360       370       380       390 
pF1KB5 FCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
       ::::::::::::::.: :.:::::::::::::  :::::: :      
XP_005 FCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT  
            350       360       370       380          

>>XP_006723471 (OMIM: 601670) PREDICTED: zinc finger pro  (396 aa)
 initn: 897 init1: 526 opt: 1273  Z-score: 726.1  bits: 143.2 E(85289): 1.1e-33
Smith-Waterman score: 1596; 58.1% identity (74.0% similar) in 415 aa overlap (1-385:1-392)

               10        20        30        40        50        60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
       ::....: .: :::..:..:.:.:..::::::::::.:::::::::::::.:::::::: 
XP_006 MATAIQNPLKSLGEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
       ::::::: ::.:.:::: :::::: .  :::::     : : .  ::::: . . :  ::
XP_006 HRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPE-GPVLE
               70        80        90       100       110          

              130          140       150       160       170       
pF1KB5 ALLRTDPLEKR---GAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTP
       ::: ..  ::.      .  .: ..: :::                  ::. :: :.: :
XP_006 ALLCAETGEKKIELKEEETIMDCQQLLEFP-----------------HDLEVEDLEDDIP
     120       130       140                        150       160  

       180       190       200       210       220       230       
pF1KB5 KRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE
       .:....:.:. :.:. ::. :.. ::::::::.::::::::::::::::::.:.::::::
XP_006 RRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEE
            170       180       190       200       210       220  

       240                        250       260       270       280
pF1KB5 GEDKEDSQP-P----------------TPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDS
       ::.. . .  :                .: .::  .. .::.::: ..::.::::::: :
XP_006 GEENAERHALPFHRKNNHKQFYKELAWVPEAQR--KHTAKKAPDGTVIPNGYCDFCLGGS
            230       240       250         260       270       280

              290       300       310       320       330          
pF1KB5 KINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSEND-
       :   ::: ::.:.::.::::::::::::::  : :::.:::::::::: :..::::::: 
XP_006 K---KTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDG
                 290       300       310       320       330       

              340       350       360       370       380       390
pF1KB5 ---------DQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNS
                ::::::::::::::::::.: :.:::::::::::::  :::::: :     
XP_006 ASWAGLTPQDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKEKASAYITLT 
       340       350       360       370       380       390       

        
pF1KB5 S

>>NP_001128627 (OMIM: 601670) zinc finger protein neuro-  (414 aa)
 initn: 1704 init1: 664 opt: 1265  Z-score: 721.5  bits: 142.4 E(85289): 1.9e-33
Smith-Waterman score: 1615; 59.7% identity (77.1% similar) in 402 aa overlap (1-385:28-410)

                                          10        20        30   
pF1KB5                            MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCA
                                  ::.:. . ..: ::..:..:.:.:..:::::::
NP_001 MGGLSARPTAGRTDPAGTCWGQDPGSKMATVIPGPLSL-GEDFYREAIEHCRSYNARLCA
               10        20        30         40        50         

            40        50        60        70        80        90   
pF1KB5 ERSVRLPFLDSQTGVAQSNCYIWMEKRHRGPGLASGQLYSYPARRWRKKRRAHPPEDPRL
       :::.:::::::::::::.:::::::: ::::::: ::.:.:::: :::::: .  :::::
NP_001 ERSLRLPFLDSQTGVAQNNCYIWMEKTHRGPGLAPGQIYTYPARCWRKKRRLNILEDPRL
      60        70        80        90       100       110         

           100       110       120       130       140       150   
pF1KB5 SFPSIKPDTDQTLKKEGLISQDGSSLEALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRA
            : : .  ::::: . . :  ::::: ..  ::.      ..   : :  .  .  
NP_001 RPCEYKIDCEAPLKKEGGLPE-GPVLEALLCAETGEKK------IE---LKEEETIMDCQ
     120       130       140        150                160         

           160       170       180       190       200       210   
pF1KB5 RKRILEPDDFLDDLDDEDYEEDTPKRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDI
       ....::   :  ::. :: :.: :.:....:.:. :.:. ::. :.. ::::::::.:::
NP_001 KQQLLE---FPHDLEVEDLEDDIPRRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDI
     170          180       190       200       210       220      

           220       230       240                        250      
pF1KB5 CGKRYKNRPGLSYHYAHSHLAEEEGEDKEDSQP-P----------------TPVSQRSEE
       :::::::::::::::.:.::::::::.. . .  :                .: .::  .
NP_001 CGKRYKNRPGLSYHYTHTHLAEEEGEENAERHALPFHRKNNHKQFYKELAWVPEAQR--K
        230       240       250       260       270       280      

        260       270       280       290       300       310      
pF1KB5 QKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAA
       . .::.::: ..::.::::::: ::   ::: ::.:.::.::::::::::::::  : ::
NP_001 HTAKKAPDGTVIPNGYCDFCLGGSK---KTGCPEDLISCADCGRSGHPSCLQFTVNMTAA
          290       300          310       320       330       340 

        320       330       340       350       360       370      
pF1KB5 VKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLD
       :.:::::::::: :..:::::::::::::::::::::::::.: :.::::::::::::: 
NP_001 VRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLR
             350       360       370       380       390       400 

        380       390 
pF1KB5 LLKEKASIYQNQNSS
        :::::: :      
NP_001 HLKEKASAYITLT  
             410      

>>NP_001267471 (OMIM: 601672) zinc finger protein DPF3 i  (378 aa)
 initn: 1867 init1: 1170 opt: 1191  Z-score: 681.2  bits: 134.8 E(85289): 3.3e-31
Smith-Waterman score: 1802; 63.0% identity (85.1% similar) in 389 aa overlap (1-388:1-377)

               10        20        30        40        50        60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
       ::.:..: .: ::.:.::.:.:.:..::.:::::::::::::::::::::.:::::::::
NP_001 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
       ::::::: ::::.:::: :::::: ::::::.: .  :::...  :::.:. :.. ..::
NP_001 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSES-TTLE
               70        80        90       100       110          

              130       140       150       160       170          
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDE-DYEEDTPKR
       :::: . .::.   : : ...:. :.        .:.:: :. ... ..: : ::: :::
NP_001 ALLRGEGVEKK--VDAR-EEESIQEI--------QRVLENDENVEEGNEEEDLEEDIPKR
     120       130          140               150       160        

     180       190       200       210       220       230         
pF1KB5 RGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGE
       ... .....: ...:.. ::.  ::.::::.::::::::::::::::::::.::: :::.
NP_001 KNRTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGD
      170       180       190       200       210       220        

     240       250       260       270       280       290         
pF1KB5 DKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCG
       . .:..  .: ..:.:... .::::: ..:::::::::: :..:::.:.:::::::.:::
NP_001 EAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCG
      230       240       250       260       270       280        

     300       310       320       330       340       350         
pF1KB5 RSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTP
       :::::.:::::  :  :::::.::::::: : .:::::::::::::::::::::::::.:
NP_001 RSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNP
      290       300       310       320       330       340        

     360       370       380       390 
pF1KB5 SMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
        ..:::::::::::: .::::::: .  :   
NP_001 PVAEPPEGSWSCHLCWELLKEKASAFGCQA  
      350       360       370          

>>XP_016877159 (OMIM: 601672) PREDICTED: zinc finger pro  (378 aa)
 initn: 1867 init1: 1170 opt: 1191  Z-score: 681.2  bits: 134.8 E(85289): 3.3e-31
Smith-Waterman score: 1802; 63.0% identity (85.1% similar) in 389 aa overlap (1-388:1-377)

               10        20        30        40        50        60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
       ::.:..: .: ::.:.::.:.:.:..::.:::::::::::::::::::::.:::::::::
XP_016 MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
       ::::::: ::::.:::: :::::: ::::::.: .  :::...  :::.:. :.. ..::
XP_016 HRGPGLAPGQLYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSES-TTLE
               70        80        90       100       110          

              130       140       150       160       170          
pF1KB5 ALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDE-DYEEDTPKR
       :::: . .::.   : : ...:. :.        .:.:: :. ... ..: : ::: :::
XP_016 ALLRGEGVEKK--VDAR-EEESIQEI--------QRVLENDENVEEGNEEEDLEEDIPKR
     120       130          140               150       160        

     180       190       200       210       220       230         
pF1KB5 RGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGE
       ... .....: ...:.. ::.  ::.::::.::::::::::::::::::::.::: :::.
XP_016 KNRTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNRPGLSYHYAHTHLASEEGD
      170       180       190       200       210       220        

     240       250       260       270       280       290         
pF1KB5 DKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCG
       . .:..  .: ..:.:... .::::: ..:::::::::: :..:::.:.:::::::.:::
XP_016 EAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCG
      230       240       250       260       270       280        

     300       310       320       330       340       350         
pF1KB5 RSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTP
       :::::.:::::  :  :::::.::::::: : .:::::::::::::::::::::::::.:
XP_016 RSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNP
      290       300       310       320       330       340        

     360       370       380       390 
pF1KB5 SMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
        ..:::::::::::: .::::::: .  :   
XP_016 PVAEPPEGSWSCHLCWELLKEKASAFGCQA  
      350       360       370          

>>XP_005259349 (OMIM: 601670) PREDICTED: zinc finger pro  (369 aa)
 initn: 1765 init1: 664 opt: 1156  Z-score: 662.1  bits: 131.2 E(85289): 3.9e-30
Smith-Waterman score: 1658; 61.9% identity (78.9% similar) in 388 aa overlap (1-385:1-365)

               10        20        30        40        50        60
pF1KB5 MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
       ::....: .: :::..:..:.:.:..::::::::::.:::::::::::::.:::::::: 
XP_005 MATAIQNPLKSLGEDFYREAIEHCRSYNARLCAERSLRLPFLDSQTGVAQNNCYIWMEKT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 HRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLE
       ::::::: ::.:.:::: :::::: .  :::::     : : .  ::::: . . :  ::
XP_005 HRGPGLAPGQIYTYPARCWRKKRRLNILEDPRLRPCEYKIDCEAPLKKEGGLPE-GPVLE
               70        80        90       100       110          

              130          140       150       160       170       
pF1KB5 ALLRTDPLEKR---GAPDPRVDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTP
       ::: ..  ::.      .  .: ..: :::                  ::. :: :.: :
XP_005 ALLCAETGEKKIELKEEETIMDCQQLLEFP-----------------HDLEVEDLEDDIP
     120       130       140                        150       160  

       180       190       200       210       220       230       
pF1KB5 KRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE
       .:....:.:. :.:. ::. :.. ::::::::.::::::::::::::::::.:.::::::
XP_005 RRKNRAKGKAYGIGGLRKRQDTASLEDRDKPYVCDICGKRYKNRPGLSYHYTHTHLAEEE
            170       180       190       200       210       220  

       240       250       260       270       280       290       
pF1KB5 GEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSD
       ::.. . .   :  .:....: ::.::: ..::.::::::: ::   ::: ::.:.::.:
XP_005 GEENAERHA-LPF-HRKNNHKPKKAPDGTVIPNGYCDFCLGGSK---KTGCPEDLISCAD
            230         240       250       260          270       

       300       310       320       330       340       350       
pF1KB5 CGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCL
       :::::::::::::  : :::.:::::::::: :..:::::::::::::::::::::::::
XP_005 CGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCL
       280       290       300       310       320       330       

       360       370       380       390 
pF1KB5 TPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
       .: :.:::::::::::::  :::::: :      
XP_005 SPPMAEPPEGSWSCHLCLRHLKEKASAYITLT  
       340       350       360           




391 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:47:49 2016 done: Fri Nov  4 03:47:51 2016
 Total Scan time:  9.380 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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