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SpecieshumanProduct IDFXC01801Cloning SiteSgfI-PmeIGeneKIBB5144SymbolSLC6A15
Alias : NTT73, SBAT1, V7-3, hv7-3Descriptionsolute carrier family 6 (neutral amino acid transporter), member 15, transcript variant 1Original Clone IDbj00334
Length: 2190 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 730 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS9026.1 0 100.0 SLC6A15 CCDS53816.1 0 100.0 SLC6A15 CCDS30799.1 0 66.3 SLC6A17 CCDS9027.1 3e-111 92.9 SLC6A15 CCDS43077.1 2.3e-101 44.7 SLC6A20
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR000175 69 90 PR00176 Sodium:neurotransmitter symporter IPR000175 98 117 PR00176 Sodium:neurotransmitter symporter IPR000175 142 168 PR00176 Sodium:neurotransmitter symporter IPR002438 196 208 PR01206 Sodium:neurotransmitter symporter IPR002438 209 220 PR01206 Sodium:neurotransmitter symporter IPR000175 253 270 PR00176 Sodium:neurotransmitter symporter IPR000175 335 355 PR00176 Sodium:neurotransmitter symporter IPR002438 358 368 PR01206 Sodium:neurotransmitter symporter IPR000175 453 472 PR00176 Sodium:neurotransmitter symporter IPR000175 530 550 PR00176 Sodium:neurotransmitter symporter IPR000175 570 590 PR00176 Sodium:neurotransmitter symporter HMMPfam IPR000175 61 643 PF00209 Sodium:neurotransmitter symporter ProfileScan IPR000175 60 646 PS50267 Sodium:neurotransmitter symporter
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 99 YLLPYLILLMVIGIPLFFLELSV 121 PRIMARY 23 2 146 ASCVVCYFVALYYNVIIGWSLFY 168 PRIMARY 23 3 224 LNWKMTICLLAAWVMVCLAMIKG 246 PRIMARY 23 4 256 FSSLFPYVVLICFLIRAFLLNGS 278 PRIMARY 23 5 300 REAATQVFFALGLGFGGVIAFS 321 SECONDARY 22 6 335 VLVSFINFFTSVLATLVVFAVLG 357 PRIMARY 23 7 462 MFFLMLVNLGLGSMFGTIEGIVT 484 SECONDARY 23 8 496 ILTVICCLLAFCIGLIFVQRSGN 518 PRIMARY 23 9 530 TLPLLIVVILENIAVCFVYGIDK 552 PRIMARY 23 10 573 WKYISPLMLLSLLIASVVNMGLS 595 PRIMARY 23 11 618 GLVVCVSLVVFAILPVPVVFIV 639 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_877499 730 607971 100.0 100.0 NP_001139807 623 607971 100.0 85.3 NP_001010898 727 610299,616269 66.3 100.0 XP_006710706 727 610299,616269 66.3 100.0 NP_064593 592 138500,242600,605616 44.7 80.8 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB5144 Download>KIBB5144 2190 bp ATGCCCAAAAATAGCAAGGTGGTAAAAAGAGAATTAGATGATGATGTTACTGAGTCTGTC AAAGACCTTCTTTCCAATGAAGACGCAGCTGATGATGCTTTTAAGACAAGTGAACTAATT GTTGATGGCCAGGAAGAGAAAGATACAGATGTTGAAGAAGGATCTGAAGTCGAAGATGAA AGACCAGCTTGGAACAGTAAACTACAATACATCCTGGCCCAAGTTGGATTTTCTGTAGGT TTAGGAAATGTGTGGCGATTTCCATACCTATGTCAGAAGAATGGGGGCGGTGCATATCTT TTACCATATTTAATACTACTTATGGTAATAGGTATTCCCCTTTTTTTCTTGGAACTCTCT GTGGGTCAAAGAATTCGGCGAGGCAGCATTGGTGTATGGAATTACATAAGCCCTAAACTG GGCGGGATTGGATTTGCAAGTTGTGTAGTGTGCTATTTTGTAGCTCTCTACTACAACGTC ATCATTGGCTGGAGTTTGTTTTATTTTTCTCAGTCTTTTCAGCAACCCCTGCCTTGGGAT CAGTGTCCTTTGGTGAAAAATGCTTCACACACTTTTGTAGAACCAGAATGTGAACAAAGT TCTGCCACCACCTATTACTGGTACAGGGAAGCACTGAATATTTCAAGTTCCATTTCTGAA AGTGGGGGCTTAAACTGGAAGATGACCATCTGCTTGTTGGCTGCCTGGGTCATGGTTTGC TTGGCTATGATCAAAGGCATTCAGTCTTCTGGAAAAATCATATATTTTAGTTCTCTGTTT CCATATGTGGTACTTATTTGCTTCCTCATCAGAGCATTCCTTTTAAATGGTTCAATTGAT GGCATTCGCCACATGTTTACCCCTAAGCTTGAAATAATGCTGGAGCCCAAGGTCTGGAGA GAAGCTGCTACTCAAGTGTTCTTTGCCTTAGGTCTGGGATTTGGTGGTGTCATTGCCTTT TCAAGCTACAACAAGAGAGACAACAACTGCCACTTTGATGCTGTCCTGGTGTCCTTCATC AATTTTTTCACTTCTGTCCTGGCAACATTGGTGGTGTTTGCAGTTCTGGGCTTCAAAGCA AATGTCATAAATGAGAAATGCATTACACAAAATTCAGAGACGATCATGAAATTTTTGAAA ATGGGGAACATTAGTCAGGATATTATTCCCCATCATATCAACCTTTCAACTGTTACTGCA GAAGATTATCATTTAGTTTATGACATCATTCAAAAAGTGAAAGAAGAAGAGTTTCCTGCT CTTCATCTCAATTCCTGTAAAATTGAAGAAGAGCTAAATAAAGCTGTTCAGGGGACCGGC TTAGCTTTTATTGCCTTTACAGAAGCGATGACACATTTTCCTGCATCTCCCTTCTGGTCA GTGATGTTTTTCCTCATGCTGGTCAATCTAGGCCTTGGCAGTATGTTTGGAACCATTGAA GGGATTGTCACGCCTATTGTGGACACTTTCAAAGTGAGGAAAGAAATTCTTACTGTTATC TGTTGTCTTCTGGCATTTTGTATTGGCCTGATATTTGTGCAACGCTCTGGAAATTACTTT GTTACAATGTTTGATGATTATTCTGCTACACTGCCTCTGCTAATTGTAGTCATTTTGGAG AATATTGCTGTATGCTTTGTTTATGGCATAGATAAGTTTATGGAAGACCTAAAAGATATG CTGGGCTTTGCTCCCAGCAGATATTACTACTATATGTGGAAATATATTTCTCCTCTAATG CTATTATCATTGCTAATAGCTAGTGTTGTGAATATGGGATTAAGTCCTCCTGGCTATAAC GCATGGATTGAAGATAAGGCATCTGAAGAATTTCTGAGCTATCCAACATGGGGACTGGTT GTTTGTGTCTCTCTGGTTGTCTTTGCAATACTCCCAGTCCCTGTAGTTTTCATTGTTCGT CGCTTCAACCTTATAGATGATAGTTCTGGTAATTTAGCATCTGTGACCTATAAGAGAGGA AGGGTCCTGAAAGAGCCTGTGAACTTAGAGGGCGATGATACAAGCCTCATTCACGGAAAA ATACCGAGCGAGATGCCATCTCCAAATTTTGGTAAAAATATTTATCGAAAACAGAGTGGA TCCCCAACTCTGGATACTGCTCCCAATGGACGGTATGGAATAGGGTACTTGATGGCAGAT ATTATGCCAGATATGCCAGAATCTGATTTG
Cloned ORF protein sequence for pF1KB5144 Download>KIBB5144 730 aa MPKNSKVVKRELDDDVTESVKDLLSNEDAADDAFKTSELIVDGQEEKDTDVEEGSEVEDE RPAWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLLPYLILLMVIGIPLFFLELS VGQRIRRGSIGVWNYISPKLGGIGFASCVVCYFVALYYNVIIGWSLFYFSQSFQQPLPWD QCPLVKNASHTFVEPECEQSSATTYYWYREALNISSSISESGGLNWKMTICLLAAWVMVC LAMIKGIQSSGKIIYFSSLFPYVVLICFLIRAFLLNGSIDGIRHMFTPKLEIMLEPKVWR EAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLATLVVFAVLGFKA NVINEKCITQNSETIMKFLKMGNISQDIIPHHINLSTVTAEDYHLVYDIIQKVKEEEFPA LHLNSCKIEEELNKAVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLVNLGLGSMFGTIE GIVTPIVDTFKVRKEILTVICCLLAFCIGLIFVQRSGNYFVTMFDDYSATLPLLIVVILE NIAVCFVYGIDKFMEDLKDMLGFAPSRYYYYMWKYISPLMLLSLLIASVVNMGLSPPGYN AWIEDKASEEFLSYPTWGLVVCVSLVVFAILPVPVVFIVRRFNLIDDSSGNLASVTYKRG RVLKEPVNLEGDDTSLIHGKIPSEMPSPNFGKNIYRKQSGSPTLDTAPNGRYGIGYLMAD IMPDMPESDL
Nucleotide Sequence (with vector) for pF1KB5144 Download>pF1KB5144 5303 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCCAAAAAT AGCAAGGTGGTAAAAAGAGAATTAGATGATGATGTTACTGAGTCTGTCAAAGACCTTCTT TCCAATGAAGACGCAGCTGATGATGCTTTTAAGACAAGTGAACTAATTGTTGATGGCCAG GAAGAGAAAGATACAGATGTTGAAGAAGGATCTGAAGTCGAAGATGAAAGACCAGCTTGG AACAGTAAACTACAATACATCCTGGCCCAAGTTGGATTTTCTGTAGGTTTAGGAAATGTG TGGCGATTTCCATACCTATGTCAGAAGAATGGGGGCGGTGCATATCTTTTACCATATTTA ATACTACTTATGGTAATAGGTATTCCCCTTTTTTTCTTGGAACTCTCTGTGGGTCAAAGA ATTCGGCGAGGCAGCATTGGTGTATGGAATTACATAAGCCCTAAACTGGGCGGGATTGGA TTTGCAAGTTGTGTAGTGTGCTATTTTGTAGCTCTCTACTACAACGTCATCATTGGCTGG AGTTTGTTTTATTTTTCTCAGTCTTTTCAGCAACCCCTGCCTTGGGATCAGTGTCCTTTG GTGAAAAATGCTTCACACACTTTTGTAGAACCAGAATGTGAACAAAGTTCTGCCACCACC TATTACTGGTACAGGGAAGCACTGAATATTTCAAGTTCCATTTCTGAAAGTGGGGGCTTA AACTGGAAGATGACCATCTGCTTGTTGGCTGCCTGGGTCATGGTTTGCTTGGCTATGATC AAAGGCATTCAGTCTTCTGGAAAAATCATATATTTTAGTTCTCTGTTTCCATATGTGGTA CTTATTTGCTTCCTCATCAGAGCATTCCTTTTAAATGGTTCAATTGATGGCATTCGCCAC ATGTTTACCCCTAAGCTTGAAATAATGCTGGAGCCCAAGGTCTGGAGAGAAGCTGCTACT CAAGTGTTCTTTGCCTTAGGTCTGGGATTTGGTGGTGTCATTGCCTTTTCAAGCTACAAC AAGAGAGACAACAACTGCCACTTTGATGCTGTCCTGGTGTCCTTCATCAATTTTTTCACT TCTGTCCTGGCAACATTGGTGGTGTTTGCAGTTCTGGGCTTCAAAGCAAATGTCATAAAT GAGAAATGCATTACACAAAATTCAGAGACGATCATGAAATTTTTGAAAATGGGGAACATT AGTCAGGATATTATTCCCCATCATATCAACCTTTCAACTGTTACTGCAGAAGATTATCAT TTAGTTTATGACATCATTCAAAAAGTGAAAGAAGAAGAGTTTCCTGCTCTTCATCTCAAT TCCTGTAAAATTGAAGAAGAGCTAAATAAAGCTGTTCAGGGGACCGGCTTAGCTTTTATT GCCTTTACAGAAGCGATGACACATTTTCCTGCATCTCCCTTCTGGTCAGTGATGTTTTTC CTCATGCTGGTCAATCTAGGCCTTGGCAGTATGTTTGGAACCATTGAAGGGATTGTCACG CCTATTGTGGACACTTTCAAAGTGAGGAAAGAAATTCTTACTGTTATCTGTTGTCTTCTG GCATTTTGTATTGGCCTGATATTTGTGCAACGCTCTGGAAATTACTTTGTTACAATGTTT GATGATTATTCTGCTACACTGCCTCTGCTAATTGTAGTCATTTTGGAGAATATTGCTGTA TGCTTTGTTTATGGCATAGATAAGTTTATGGAAGACCTAAAAGATATGCTGGGCTTTGCT CCCAGCAGATATTACTACTATATGTGGAAATATATTTCTCCTCTAATGCTATTATCATTG CTAATAGCTAGTGTTGTGAATATGGGATTAAGTCCTCCTGGCTATAACGCATGGATTGAA GATAAGGCATCTGAAGAATTTCTGAGCTATCCAACATGGGGACTGGTTGTTTGTGTCTCT CTGGTTGTCTTTGCAATACTCCCAGTCCCTGTAGTTTTCATTGTTCGTCGCTTCAACCTT ATAGATGATAGTTCTGGTAATTTAGCATCTGTGACCTATAAGAGAGGAAGGGTCCTGAAA GAGCCTGTGAACTTAGAGGGCGATGATACAAGCCTCATTCACGGAAAAATACCGAGCGAG ATGCCATCTCCAAATTTTGGTAAAAATATTTATCGAAAACAGAGTGGATCCCCAACTCTG GATACTGCTCCCAATGGACGGTATGGAATAGGGTACTTGATGGCAGATATTATGCCAGAT ATGCCAGAATCTGATTTGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGAT CCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTC AGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTG CTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCT ACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCT TCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCT CGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGG GTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTC GTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGA GCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGG CAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTA TAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGG GGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTG CTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTAT TACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA CATTCAAATATGTATCCGCTCAT
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