Gene/Protein Characteristic Table for KIAA0074
Order Kazusa clone(s) from : Japan || Other countries
Product ID ORK00396
Accession No D38553
Description non-SMC condensin I complex, subunit H, transcript variant 1
Clone name ha01438
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (2726 bp)
Predicted protein sequence (747 aa)
Flexi ORF Clone FXC00396
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0074 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 2726 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 481 bp
Genome contig ID gi89161199f_96271103
PolyA signal sequence
Flanking genome sequence
(132196 - 132245)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 2 f 96365276 96403297 18 100.0 Perfect prediction
Features of the protein sequence

Length: 747 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAA07556 0 100.0 HCAP-H [Homo sa...
Homo sapiens
Q15003 0 100.0 Condensin compl...
Homo sapiens
AAH24211 0 99.9 Non-SMC condens...
Homo sapiens
BAF83742 0 99.7 unnamed protein...
Homo sapiens
XP_001148661 0 99.3 barren isoform ...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR008418 33 746 PF05786 Barren
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 2
Experimental conditions
Panel name Stanford G3
PCR product length 174 (4.0k) bp
PCR conditions 95 °C15 sec64 °C300 sec30 cycles
Order Kazusa clone(s) from : Japan || Other countries
Back to the HUGE Protein Database homepage
Send a message to office AT