Gene/Protein Characteristic Table for KIAA1214
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Product ID ORK00768
Accession No AB033040
Description ring finger protein 150
Clone name fh01431
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5111 bp)
Predicted protein sequence (462 aa)
Flexi ORF Clone FXC00768
Source Human fetal brain
Rouge ID mKIAA1214 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5111 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 3266 bp
Genome contig ID gi89161207r_141906175
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
GTTTCTGGAGGATTTTCCTGTAGCTTTGATAGTTT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAAAAAAAAAAAAAAAAGAAAAAAAAAAAGCTTAACCAGAAAGTTTCTCT

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 4 r 142006175 142274066 8 100.0 Internal No-hit
Features of the protein sequence
Description

Length: 462 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EAX05090 8.1e-150 100.0 ring finger pro...
Homo sapiens
Q9ULK6 2.3e-72 90.4 RING finger pro...
Homo sapiens
BAC85369 4.9e-69 84.5 unnamed protein...
Homo sapiens
XP_001502278 6.5e-67 87.5 ring finger pro...
Equus caballus
XP_871924 1.3e-66 78.6 similar to RING...
Bos taurus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB051436 1.7e-07 26.1 KIAA1133
AB029023 1.4e-05 34.4 KIAA1100
AB014575 0.00028 38.9 KIAA0675
AB007898 0.00049 31.4 KIAA0438
AB058713 0.00066 28.6 KIAA1810
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR003137 147 249 PF02225 Protease-associated PA
IPR001841 302 342 PF00097 Zinc finger
HMMSmart IPR001841 302 342 SM00184 Zinc finger
ProfileScan IPR001841 302 343 PS50089 Zinc finger

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 72 IQACCSLALSTWLLSFCFVHLLC 94 PRIMARY 23
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f CCAAGAACTAGGTGAATCAGG
Primer_r AGTAGTGAATGGCAAAGGCTC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 4
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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