Gene/Protein Characteristic Table for KIAA0768
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Product ID ORK05865
Accession No AB018311
Description adhesion G protein-coupled receptor L3
Clone name hk05006
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4150 bp)
Predicted protein sequence (872 aa)
Source Human adult brain
Rouge ID mKIAA0768 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4150 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 872 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q9HAR2 0 100.0 Latrophilin-3; ...
Homo sapiens
XP_001135082 0 99.9 latrophilin 3 i...
Pan troglodytes
BAE26219 0 95.4 unnamed protein...
Mus musculus
EDL89863 0 95.5 latrophilin 3, ...
Rattus norvegicus
AAC62660 0 95.5 CL3AA [Rattus n...
Rattus norvegicus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB018329 5.5e-136 56.1 KIAA0786
AB020628 3.7e-125 48.2 KIAA0821
D87469 3.2e-37 32.1 KIAA0279
AB011536 1.2e-29 29.9 KIAA0812
AB011122 9.8e-26 22.6 KIAA0550
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR000832 291 315 PR00249 GPCR
IPR003924 316 331 PR01444 Latrophilin receptor
IPR000832 354 377 PR00249 GPCR
IPR000832 392 417 PR00249 GPCR
IPR000832 434 459 PR00249 GPCR
IPR000832 508 529 PR00249 GPCR
IPR003924 530 542 PR01444 Latrophilin receptor
HMMPfam IPR000203 226 273 PF01825 GPS
IPR000832 286 533 PF00002 GPCR
IPR003334 542 872 PF02354 Latrophilin
HMMSmart IPR000203 226 278 SM00303 GPS
ProfileScan IPR000203 227 278 PS50221 GPS
IPR000832 289 530 PS50261 GPCR
ScanRegExp IPR000832 518 533 PS00650 GPCR

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 289 LDVITWVGILLSLVCLLICIFTF 311 PRIMARY 23
2 323 TIHKNLCISLFVAELLFLIGIN 344 SECONDARY 22
3 358 LLHFFFLAAFTWMFLEGVQLYIM 380 PRIMARY 23
4 395 FYLVGYGMPALIVAVSAAVD 414 PRIMARY 20
5 434 WSFIGPATLIIMLNVIFLGIALY 456 PRIMARY 23
6 477 SWVIGAIALLCLLGLTWAFGLMY 499 PRIMARY 23
7 507 MAYLFTIFNSLQGMFIFIFHCVL 529 PRIMARY 23
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f AGCAGTTCATCACCAGGACAC
Primer_r TGACCTTCCAATGCTTACGAG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 4
Experimental conditions
Panel name UniGene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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