ROUGE

Gene/Protein Characteristic Table for mKIAA4152

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AK220510
Description :	ectonucleotide pyrophosphatase/phosphodiesterase 5.
Clone Name :	mbf03536 [Vector Info]
Source :	Mouse brain

Features of the cloned DNA sequence	Description

Length: 2471 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
YES

Integrity of 3' end

Length of 3'UTR 922 bp

Genome contig ID gi65550231f_41482324
PolyA signal sequence
(ATTAAA,-23)
+----*----+----*----+----*----+----
ATTATTAATCATATTAAAAAAATCAAGTGAGATTT
Flanking genome sequence
(107736 - 107785)
----+----*----+----*----+----*----+----*----+----*
AAAAAAAATAGTGTTTTGTTTTGCTTACTGGTTGTTTCTGGTGGCAAGAA

Genomic structure deduced by Blast search against draft genome sequences

Features of the protein sequence	Description

Coding region: 113..1546
Length: 478 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
EDL23416	2.6e-212	100.0	ectonucleotide ...	Mus musculus
JC8005	6.6e-212	99.8	nucleotide pyro...	Mus musculus
Q9EQG7	1.4e-211	99.6	Ectonucleotide ...	Mus musculus
P84039	9.1e-197	91.6	Ectonucleotide ...	Rattus norvegicus
XP_001502670	8e-178	82.2	ectonucleotide ...	Equus caballus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	ROUGE_ID
AK173048	2.4e-25	45.1	mKIAA0879

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR002591 29 343 PF01663 Type I phosphodiesterase/nucleotide pyrophosphatase

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR002591	29	343	PF01663	Type I phosphodiesterase/nucleotide pyrophosphatase

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 2 23 MIPEFLLASCTLATLCHSAPFS

437 459 GVSLGSIIAMVFFVVLIKHLIRS

Method	From	To	amino acid sequence
SOSUI	2	23	MIPEFLLASCTLATLCHSAPFS
437	459	GVSLGSIIAMVFFVVLIKHLIRS

How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	YES

Length of 3'UTR	922 bp
Genome contig ID	gi65550231f_41482324
PolyA signal sequence (ATTAAA,-23)	+--------+--------+----*----+---- ATTATTAATCATATTAAAAAAATCAAGTGAGATTT
Flanking genome sequence (107736 - 107785)	----+--------+--------+--------+--------+----* AAAAAAAATAGTGTTTTGTTTTGCTTACTGGTTGTTTCTGGTGGCAAGAA

Gene/Protein Characteristic Table for mKIAA4152

Features of the cloned DNA sequence

Features of the protein sequence