ROUGE

Gene/Protein Characteristic Table for mKIAA4032

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AK220169
Description :	Transmembrane GTPase MFN1.
Clone Name :	mpg00417 [Vector Info]
Source :	Mouse embryonic tail

Features of the cloned DNA sequence	Description

Length: 4515 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 2080 bp

Genome contig ID gi65492966f_31837673
PolyA signal sequence
(AATAAA,-20)
+----*----+----*----+----*----+----
AGCTTGCAAGATGAAAATAAACCTATCTGCCTATT
Flanking genome sequence
(149733 - 149782)
----+----*----+----*----+----*----+----*----+----*
AGTTGGTAAATATAGCATTTATCTCAGTTAGTGACTGTTTTCCACTCCCT

Genomic structure deduced by Blast search against draft genome sequences

Features of the protein sequence	Description

Coding region: 186..2432
Length: 749 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
EDL35000	100.0	mitofusin 1, is...	Mus musculus
Q811U4	100.0	Mitofusin-1; Tr...	Mus musculus
AAO34660	99.9	mitofusin 1 [Mu...	Mus musculus
BAB31111	98.8	unnamed protein...	Mus musculus
Q8R4Z9	98.8	Mitofusin-1; Tr...	Rattus norvegicus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	ROUGE_ID
AK122220	9e-178	66.3	mKIAA0214

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR001401 86 246 PF00350 Dynamin

IPR006884 575 745 PF04799 Fzo-like conserved region

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001401	86	246	PF00350	Dynamin
IPR006884	575	745	PF04799	Fzo-like conserved region

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 9 31 MAETVSPLKHFVLAKKAITAIFG

608 630 IVVGGVIWKTVGWKLISVTLSMY

Method	From	To	amino acid sequence
SOSUI	9	31	MAETVSPLKHFVLAKKAITAIFG
608	630	IVVGGVIWKTVGWKLISVTLSMY

How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	2080 bp
Genome contig ID	gi65492966f_31837673
PolyA signal sequence (AATAAA,-20)	+--------+--------+----*----+---- AGCTTGCAAGATGAAAATAAACCTATCTGCCTATT
Flanking genome sequence (149733 - 149782)	----+--------+--------+--------+--------+----* AGTTGGTAAATATAGCATTTATCTCAGTTAGTGACTGTTTTCCACTCCCT

Gene/Protein Characteristic Table for mKIAA4032

Features of the cloned DNA sequence

Features of the protein sequence