ROUGE

Gene/Protein Characteristic Table for mKIAA1463

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AB093297
Description :
Clone Name :	mbg00760 [Vector Info]
Source :	Mouse brain

Features of the cloned DNA sequence	Description

Length: 6921 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 4033 bp

Genome contig ID gi65543215f_100129172
PolyA signal sequence
(AATAAA,-18)
+----*----+----*----+----*----+----
TTCCTTTGTCTTGTGTTAATAAATATTGATGCTTG
Flanking genome sequence
(147842 - 147891)
----+----*----+----*----+----*----+----*----+----*
ATTATGTTTAATTCTTAAACCTTGGGTGGAGCTGGGTGGTGTTGGGATAG

Genomic structure deduced by Blast search against draft genome sequences
Comparison with the corresponding KIAA cDNA.

KIAA Alignment based on:

KIAA1463 DNA sequence, AA sequence

KIAA	Alignment based on:
KIAA1463	DNA sequence, AA sequence

Features of the protein sequence	Description

Coding region: 3..2888
Length: 961 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAC26764	100.0	unnamed protein...	Mus musculus
AAI37859	100.0	DIP2 disco-inte...	Mus musculus
Q3UH60	100.0	Disco-interacti...	Mus musculus
Q9P265	98.5	Disco-interacti...	Homo sapiens
EAW58150	98.5	DIP2 disco-inte...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	ROUGE_ID
AK173066	0	78.3	mKIAA0934
AB093213	0	77.4	mKIAA0184

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR000873 407 880 PF00501 AMP-dependent synthetase and ligase

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000873	407	880	PF00501	AMP-dependent synthetase and ligase

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 438 460 YPPGIELIAAFYGCLYAGCIPVT

576 598 SSRQIAICLDPYCGLGFALWCLC

874 896 SIAECAVFTWTNLLVVVVELCGS

906 928 LVTNVVLEEHYLIVGVVVVVDPG

Method	From	To	amino acid sequence
SOSUI	438	460	YPPGIELIAAFYGCLYAGCIPVT
576	598	SSRQIAICLDPYCGLGFALWCLC
874	896	SIAECAVFTWTNLLVVVVELCGS
906	928	LVTNVVLEEHYLIVGVVVVVDPG

How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	4033 bp
Genome contig ID	gi65543215f_100129172
PolyA signal sequence (AATAAA,-18)	+--------+--------+----*----+---- TTCCTTTGTCTTGTGTTAATAAATATTGATGCTTG
Flanking genome sequence (147842 - 147891)	----+--------+--------+--------+--------+----* ATTATGTTTAATTCTTAAACCTTGGGTGGAGCTGGGTGGTGTTGGGATAG

Gene/Protein Characteristic Table for mKIAA1463

Features of the cloned DNA sequence

Features of the protein sequence