ROUGE

Gene/Protein Characteristic Table for mKIAA0184

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AB093213
Description :	Disco-interacting protein 2 homolog.
Clone Name :	mbg08693 [Vector Info]
Source :	Mouse brain

Features of the cloned DNA sequence	Description

Length: 6023 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 1570 bp

Genome contig ID gi65524842r_76264792
PolyA signal sequence
(AATAAA,-21)
+----*----+----*----+----*----+----
TTTTATATCATGTTAATAAAAGCTATTGACTTTGT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AATTCTGCATTTTGAAATGTGTGAAAGGGTTTTTAAAAGTTTCCCAAAAC

Genomic structure deduced by Blast search against draft genome sequences
Comparison with the corresponding KIAA cDNA.

KIAA Alignment based on:

KIAA0184 DNA sequence, AA sequence

KIAA	Alignment based on:
KIAA0184	DNA sequence, AA sequence

Features of the protein sequence	Description

Coding region: 2..4453
Length: 1483 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
AAH68227	100.0	Dip2a protein [...	Mus musculus
Q8BWT5	99.9	Disco-interacti...	Mus musculus
XP_001070526	98.1	similar to Disc...	Rattus norvegicus
XP_001070487	98.2	similar to Disc...	Rattus norvegicus
XP_001489414	94.8	similar to Disc...	Equus caballus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	ROUGE_ID
AK173066	0	81.2	mKIAA0934
AB093297	0	77.4	mKIAA1463

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR000873 930 1402 PF00501 AMP-dependent synthetase and ligase

ScanRegExp IPR000634 503 516 PS00165 Serine/threonine dehydratase

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000873	930	1402	PF00501	AMP-dependent synthetase and ligase
ScanRegExp	IPR000634	503	516	PS00165	Serine/threonine dehydratase

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 240 255 GTNGPLSLLAALQLWG

321 343 VMFMVAFYGCLLAELVPVPIEVP

348 370 DAGSQQVGFLLGSCGVTLALTTD

Method	From	To	amino acid sequence
SOSUI	240	255	GTNGPLSLLAALQLWG
321	343	VMFMVAFYGCLLAELVPVPIEVP
348	370	DAGSQQVGFLLGSCGVTLALTTD

How to obtain mKIAA clone(s) Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	1570 bp
Genome contig ID	gi65524842r_76264792
PolyA signal sequence (AATAAA,-21)	+--------+--------+----*----+---- TTTTATATCATGTTAATAAAAGCTATTGACTTTGT
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* AATTCTGCATTTTGAAATGTGTGAAAGGGTTTTTAAAAGTTTCCCAAAAC

Gene/Protein Characteristic Table for mKIAA0184

Features of the cloned DNA sequence

Features of the protein sequence